Anchorpoints

Gene id
CRU_006G13470
Organism
Capsella rubella

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CRU_003G01280No description available.scaffold_3+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL3G01310No description available.scaffold_3+View
AL6G15490No description available.scaffold_6+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G15650reversibly glycosylated polypeptide 2 reversibly glycosylated polypeptide 2 (RGP2); FUNCTIONS IN: transferase activity, transferring hexosyl groups, glycogenin glucosyltransferase activity; INVOLVED IN: response to cadmium ion, response to salt stress; LOCATED IN: cytosolic ribosome, cell wall, membrane; EXPRESSED IN: male gametophyte, guard cell, root, cultured cell, leaf; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Alpha-1,4-glucan-protein synthase, UDP-forming (InterPro:IPR004901); BEST Arabidopsis thaliana protein match is: reversibly glycosylated polypeptide 1 (TAIR:AT3G02230.1); Has 259 Blast hits to 255 proteins in 45 species: Archae - 24; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 223; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). RGP2 is a UDP-arabinose mutase that catalyzes the interconversion between the pyranose and furanose forms of UDP-L-arabinose. It appears to be required for proper cell wall formation. rgp1(at3g02230)/rgp2 double mutants have a male gametophyte lethal phenotype. RGP2 fusion proteins can be found in the cytosol and peripherally associated with the Golgi apparatus. RGP2 was originally identified as Reversibly Glycosylated Polypeptide-2. Constitutive expression in tobacco impairs plant development and virus spread.5+View
AT3G02230RGP1 is a UDP-arabinose mutase that catalyzes the interconversion between the pyranose and furanose forms of UDP-L-arabinose. It appears to be required for proper cell wall formation. rgp1/rgp2 (at5g15650) double mutants have a male gametophyte lethal phenotype. RGP1 fusion proteins can be found in the cytosol and peripherally associated with the Golgi apparatus. reversibly glycosylated polypeptide 1 reversibly glycosylated polypeptide 1 (RGP1); FUNCTIONS IN: cellulose synthase (UDP-forming) activity; INVOLVED IN: response to salt stress, plant-type cell wall biogenesis; LOCATED IN: cytosolic ribosome, Golgi stack, cell wall, plasma membrane, Golgi trans cisterna; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Alpha-1,4-glucan-protein synthase, UDP-forming (InterPro:IPR004901); BEST Arabidopsis thaliana protein match is: reversibly glycosylated polypeptide 2 (TAIR:AT5G15650.1); Has 260 Blast hits to 255 proteins in 45 species: Archae - 24; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 224; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).3+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR10G19490No description available.A10-View
BR02G07570No description available.A02+View
BR03G06540No description available.A03+View
BR03G28840No description available.A03+View
BR05G35720No description available.A05-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL07G17350No description available.Chr7-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00014G02130No description available.supercontig_14+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00030G00800No description available.scaffold00030-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0011G21240No description available.scaffold_11+View
EG0009G17260No description available.scaffold_9+View
EG0002G05420No description available.scaffold_2+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM06G22440No description available.Gm06+View
GM19G04240No description available.Gm19-View
GM18G50780No description available.Gm18-View
GM13G06690No description available.Gm13-View
GM08G27590No description available.Gm08-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR07G17670No description available.Chr07+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD06G016910No description available.6+View
MD09G005110No description available.9+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME04043G01790No description available.scaffold04043-View
ME06656G00900No description available.scaffold06656-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS07G41360UDP-arabinopyranose mutase 3 alpha-1,4-glucan-protein synthase, putative, expressed7+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_003G22910No description available.scaffold_3-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT04G11780No description available.Chr04+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL02G065740Alpha-1 4-glucan-protein synthase (UDP-forming) (AHRD V1 **-* Q2HV87_MEDTR)%3B contains Interpro domain(s) IPR004901 Alpha-1%2C4-glucan-protein synthase%2C UDP-formingch02-View
SL02G089170Alpha-1 4-glucan-protein synthase (AHRD V1 **-* B9RLK7_RICCO)%3B contains Interpro domain(s) IPR004901 Alpha-1%2C4-glucan-protein synthase%2C UDP-formingch02+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST02G033720Alpha-1 4-glucan-protein synthase (AHRD V1 **-* B9RLK7_RICCO); contains Interpro domain(s) IPR004901 Alpha-1,4-glucan-protein synthase, UDP-formingchr02-View
ST02G012600Alpha-1 4-glucan-protein synthase (AHRD V1 **-* B9RLK7_RICCO); contains Interpro domain(s) IPR004901 Alpha-1,4-glucan-protein synthase, UDP-formingchr02-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP6G28460similar to AT5G15650|RGP2 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 2)ch6-6-View
TP3G01300similar to AT3G02230|RGP1 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 1)ch3-1+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV14G16160name=GSVIVG01036557001;chr14-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM07G26710LOC1002826147+View


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Gene id
Species
Description
Chromosome
Strand