Gene: CRU_006G13470 (Capsella rubella)

Overview top

Gene Identifier
CRU_006G13470
Transcript Identifier
CRU_006G13470.1
Gene Type
Coding gene
Location
scaffold_6 : 5135858-5137744 : positive

Family

Gene family
HOM03D000730
(191 genes in 29 species)
specific family
Subfamily
ORTHO03D000203
(128 genes in 29 species)
specific family
Duplication type
Block duplicate

Loading...please wait

Descriptions

Description (AnnoMine)
4-glucan-protein synthase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameCarubv10001241m.g
idPAC:20908668

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0071555IEAGenome Projectcell wall organization
GO:0030244IEAGenome Projectcellulose biosynthetic process
GO:0009555ISOPLAZA Integrative Orthologypollen developmentAT5G15650 AT3G02230
GO:0071669ISOPLAZA Integrative Orthologyplant-type cell wall organization or biogenesisAT5G15650
GO:0033356ISOPLAZA Integrative OrthologyUDP-L-arabinose metabolic processAT5G15650 AT3G02230
GO:0009651ISOPLAZA Integrative Orthologyresponse to salt stressAT5G15650 AT3G02230
GO:0046686ISOPLAZA Integrative Orthologyresponse to cadmium ionAT5G15650
GO:0009832ISOPLAZA Tree-based Orthologyplant-type cell wall biogenesisAT3G02230
GO:0051274IEAPLAZA Homologybeta-glucan biosynthetic processHOM03D000730
GO:0051273IEAPLAZA Homologybeta-glucan metabolic processHOM03D000730
GO:0044264IEAPLAZA Homologycellular polysaccharide metabolic processHOM03D000730
GO:0044262IEAPLAZA Homologycellular carbohydrate metabolic processHOM03D000730
GO:0006073IEAPLAZA Homologycellular glucan metabolic processHOM03D000730
GO:0016051IEAPLAZA Homologycarbohydrate biosynthetic processHOM03D000730
GO:0033692IEAPLAZA Homologycellular polysaccharide biosynthetic processHOM03D000730
GO:0005976IEAPLAZA Homologypolysaccharide metabolic processHOM03D000730
GO:0044723IEAPLAZA Homologysingle-organism carbohydrate metabolic processHOM03D000730
GO:0034637IEAPLAZA Homologycellular carbohydrate biosynthetic processHOM03D000730
GO:0009250IEAPLAZA Homologyglucan biosynthetic processHOM03D000730
GO:0030243IEAPLAZA Homologycellulose metabolic processHOM03D000730
GO:0044042IEAPLAZA Homologyglucan metabolic processHOM03D000730
GO:0000271IEAPLAZA Homologypolysaccharide biosynthetic processHOM03D000730

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008466IEAGenome Projectglycogenin glucosyltransferase activity
GO:0016758IEAGenome Projecttransferase activity, transferring hexosyl groups
GO:0016866IEAInterProintramolecular transferase activity
GO:0052691ISOPLAZA Integrative OrthologyUDP-arabinopyranose mutase activityAT5G15650 AT3G02230
GO:0005515ISOPLAZA Tree-based Orthologyprotein bindingAT3G02230
GO:0016853IEAPLAZA Homologyisomerase activityHOM03D000730

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005618IEAGenome Projectcell wall
GO:0030054IEAGenome Projectcell junction
GO:0005794ISOPLAZA Integrative OrthologyGolgi apparatusAT5G15650
GO:0022626ISOPLAZA Integrative Orthologycytosolic ribosomeAT5G15650 AT3G02230
GO:0000138ISOPLAZA Tree-based OrthologyGolgi trans cisternaAT3G02230
GO:0005774ISOPLAZA Tree-based Orthologyvacuolar membraneAT3G02230

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR004901Reversibly glycosylated polypeptide family

Mapman id Description
10.5.5cell wall.cell wall proteins.RGP
No SignalP domains detected for this gene.