Anchorpoints

Gene id
CRU_005G20690
Organism
Capsella rubella

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL5G25470No description available.scaffold_5-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G553603-oxo-5-alpha-steroid 4-dehydrogenase family protein Enoyl-CoA reductase is involved in all very long chain fatty acids (VLCFA) elongation reactions that are required for cuticular wax, storage lipid and sphingolipid metabolism. The protein is located in the ER, but in contrast to its yeast homolog TSC13 is not particularly enriched in the nuclear envelope-vacuole junction. Mutants in this gene show abnormal organ morphology and stem glossiness. Cells in all tissues are only about 1/3 of the size of wild type cells. The morphological changes are most likely to result from the reduction in the VLCFA content of sphingolipids. Mutants also show abnormalities in the endocytic membrane organization and transport. ECERIFERUM 10 (CER10); FUNCTIONS IN: fatty acid elongase activity, trans-2-enoyl-CoA reductase (NADPH) activity, 3-oxo-5-alpha-steroid 4-dehydrogenase activity; INVOLVED IN: sphingolipid metabolic process, wax biosynthetic process; LOCATED IN: endoplasmic reticulum, fatty acid elongase complex, plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal (InterPro:IPR001104); BEST Arabidopsis thaliana protein match is: 3-oxo-5-alpha-steroid 4-dehydrogenase family protein (TAIR:AT5G16010.1); Has 1087 Blast hits to 1087 proteins in 269 species: Archae - 0; Bacteria - 73; Metazoa - 353; Fungi - 144; Plants - 184; Viruses - 0; Other Eukaryotes - 333 (source: NCBI BLink).3-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR09G36220No description available.A09-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL04G08110No description available.Chr4-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00024G00470No description available.scaffold00024-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_002G22630No description available.scaffold_2+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT08G05540No description available.Chr08+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G07110similar to AT3G55360|CER10ch5-1+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV13G05300name=GSVIVG01016549001;chr13-View


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Gene id
Species
Description
Chromosome
Strand