Anchorpoints

Gene id
CRU_001G02170
Organism
Capsella rubella

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL1G02500No description available.scaffold_1+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G03190ULTRAVIOLET HYPERSENSITIVE 6 (UVH6); FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA repair, response to UV, response to heat; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Helicase, superfamily 1/2, ATP-binding domain, DinG/Rad3-type (InterPro:IPR014013), Xeroderma pigmentosum group D protein (InterPro:IPR001945), Helicase-like, DEXD box c2 type (InterPro:IPR006554), Helicase, ATP-dependent, c2 type (InterPro:IPR006555), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD2 (InterPro:IPR010614), DNA helicase (DNA repair), Rad3 type (InterPro:IPR013020), Protein of unknown function DUF1227 (InterPro:IPR010643); BEST Arabidopsis thaliana protein match is: RAD3-like DNA-binding helicase protein (TAIR:AT1G20720.1); Has 3290 Blast hits to 2576 proteins in 779 species: Archae - 308; Bacteria - 1186; Metazoa - 653; Fungi - 359; Plants - 198; Viruses - 2; Other Eukaryotes - 584 (source: NCBI BLink). RAD3-like DNA-binding helicase protein UV damage and heat induce a common stress response in plants that leads to tissue death and reduced chloroplast function. The UVH6 product is suggested to be a negative regulator of this response.1+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR08G31810No description available.A08-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL09G06490No description available.Chr9-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00026G01650No description available.CM3.5_scaffold00026+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00022G01510No description available.scaffold00022+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0011G28490No description available.scaffold_11+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV2G25260DNA repair helicase UVH6 (AtUVH6) (putative)LG2+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR07G13650No description available.Chr07-View
GR04G08120No description available.Chr04+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME11998G01060No description available.scaffold11998+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_008G25590No description available.scaffold_8+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT02G05400No description available.Chr02+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29647G01060No description available.29647+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G27920No description available.scaffold_1+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G02210similar to AT1G03190|UVH6 (ULTRAVIOLET HYPERSENSITIVE 6)ch1-1+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV07G04910name=GSVIVG01011125001;chr7+View


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Gene id
Species
Description
Chromosome
Strand