Anchorpoints
- Gene id
- AT2G20030
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT4G28890 | RING/U-box superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: root stele, root endodermis, hypocotyl, root, primary root differentiation zone; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G20030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). RING/U-box superfamily protein | 4 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL7G12880 | No description available. | scaffold_7 | + | View |
AL3G36010 | No description available. | scaffold_3 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR01G08280 | No description available. | A01 | + | View |
BR02G21970 | No description available. | A02 | + | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV8G05100 | No description available. | Bvchr8.sca018 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00040G00310 | No description available. | supercontig_40 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_003G33000 | No description available. | scaffold_3 | + | View |
CRU_007G11080 | No description available. | scaffold_7 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00027G00260 | No description available. | scaffold00027 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0003G29340 | No description available. | scaffold_3 | + | View |
EG0003G08370 | No description available. | scaffold_3 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV0G35220 | RING-H2 finger protein ATL4J, Precursor (probable) | scf0513146 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM04G08847 | No description available. | Gm04 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR10G07480 | No description available. | Chr10 | - | View |
GR01G00770 | No description available. | Chr01 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD02G005330 | No description available. | 2 | - | View |
MD15G013590 | No description available. | 15 | - | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME09501G00610 | No description available. | scaffold09501 | + | View |
ME00847G00690 | No description available. | scaffold00847 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_007G24350 | No description available. | scaffold_7 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT06G23950 | No description available. | Chr06 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL12G007320 | Ring H2 finger protein (AHRD V1 *-*- D9ZHD8_HYPPE)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-type | ch12 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST12G009440 | E3 ubiquitin-protein ligase Os04g0590900 (AHRD V1 *-** ATL41_ORYSJ); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-type | chr12 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0009G04120 | No description available. | scaffold_9 | - | View |
TC0009G09960 | No description available. | scaffold_9 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP7G26870 | similar to AT4G28890|protein binding / ubiquitin-protein ligase/ zinc ion binding | ch7-5 | - | View |
TP3G33350 | similar to AT2G20030|zinc finger (C3HC4-type RING finger) family protein | ch3-6 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV11G04720 | name=GSVIVG01015336001; | chr11 | + | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM04G26210 | No description available. | 4 | + | View |