Gene: AT4G28890 (Arabidopsis thaliana)

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Gene Identifier
AT4G28890
Transcript Identifier
AT4G28890.1
Gene Type
Coding gene
Location
4 : 14256437-14257735 : negative

Family

Gene family
HOM03D000017
(2380 genes in 31 species)
specific family
Subfamily
ORTHO03D003016
(39 genes in 25 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
RING/U-box superfamily protein
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Identifiers

Identifier Name
uniprotQ5XF85

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0016567IDAGene Ontologyprotein ubiquitination1
GO:0000041RCAGene Ontologytransition metal ion transport1
GO:0048527RCAGene Ontologylateral root development1
GO:0048589RCAGene Ontologydevelopmental growth1
GO:0048765RCAGene Ontologyroot hair cell differentiation1
GO:0048767RCAGene Ontologyroot hair elongation1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008270IEA, ISSUniProtzinc ion binding1 2 3 4 5 6
GO:0004842IDAUniProtubiquitin-protein ligase activity1 2 3 4 5 6
GO:0005515IEAInterProprotein binding
GO:0043169IEAPLAZA Homologycation bindingHOM03D000017
GO:0005488IEAPLAZA HomologybindingHOM03D000017
GO:0043167IEAPLAZA Homologyion bindingHOM03D000017
GO:0046914IEAPLAZA Homologytransition metal ion bindingHOM03D000017
GO:0046872IEAPLAZA Homologymetal ion bindingHOM03D000017

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016021IEAUniProtintegral to membrane1 2 3 4 5

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR001841Zinc finger, RING-type

Mapman id Description
29.5.11.4.2protein.degradation.ubiquitin.E3.RING
SignalP Description
SignalP-TMSignal Peptide detected using TM network