Anchorpoints

Gene id
AT1G18650
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT3G57240'beta-1,3-glucanase 3' (BG3); FUNCTIONS IN: cellulase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: response to bacterium; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-1,3-glucanase 2 (TAIR:AT3G57260.1); Has 2135 Blast hits to 2122 proteins in 137 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 16; Plants - 2105; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). encodes a member of glycosyl hydrolase family 17 beta-1,3-glucanase 33-View
AT5G61130plasmodesmata callose-binding protein 1 (PDCB1); FUNCTIONS IN: callose binding, polysaccharide binding; INVOLVED IN: callose deposition in cell wall; LOCATED IN: plasmodesma, anchored to plasma membrane, plasma membrane, anchored to membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: glucan endo-1,3-beta-glucosidase-like protein 3 (TAIR:AT5G08000.1); Has 2214 Blast hits to 2014 proteins in 207 species: Archae - 0; Bacteria - 106; Metazoa - 136; Fungi - 241; Plants - 1436; Viruses - 12; Other Eukaryotes - 283 (source: NCBI BLink). Encodes a plasmodesmatal localized protein with callose binding activity. The function of PDCB1 is unknown but overexpression leads to the hyperaccumulation of callose. plasmodesmata callose-binding protein 15-View
AT5G18220O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT3G04010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). O-Glycosyl hydrolases family 17 protein5-View
AT2G42930Carbohydrate-binding X8 domain superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT2G30933.1); Has 1319 Blast hits to 1271 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1319; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). Carbohydrate-binding X8 domain superfamily protein2-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL6G07700No description available.scaffold_6+View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00022G02030No description available.scaffold00022+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR06G09150No description available.A06-View
BR07G15140No description available.A07-View
BR09G05500No description available.A09-View
BR10G25790No description available.A10+View
BR04G02900No description available.A04+View
BR02G38040No description available.A02-View
BR05G16040No description available.A05-View
BR07G08140No description available.A07-View
BR09G48710No description available.A09+View
BR09G37810No description available.A09-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV0G75840No description available.Bvchr5_un.sca003+View
BV3G12030No description available.Bvchr3.sca010+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL04G11650No description available.Chr4-View
CL06G16270No description available.Chr6-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00007G01820No description available.CM3.5_scaffold00007+View
CM00030G01450No description available.CM3.5_scaffold00030+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00094G00400No description available.supercontig_94+View
CP00001G01180No description available.supercontig_1+View
CP00017G01130No description available.supercontig_17-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_005G12060No description available.scaffold_5-View
CRU_003G03100No description available.scaffold_3-View
CRU_001G17490No description available.scaffold_1-View
CRU_004G24480No description available.scaffold_4-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00057G00470No description available.scaffold00057-View
CS00019G02130No description available.scaffold00019-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0001G16430No description available.scaffold_1-View
EG0004G13330No description available.scaffold_4-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV5G12210Glucan endo-1,3-beta-glucosidase-like protein 3, Precursor (similar to)LG5-View
FV0G29760Glucan endo-1,3-beta-glucosidase 11 ((1->3)-beta-glucanase 11), Precursor (probable)scf0513178-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM05G00470No description available.Gm05-View
GM17G08570No description available.Gm17+View
GM19G31580No description available.Gm19-View
GM06G21982No description available.Gm06+View
GM13G22640No description available.Gm13+View
GM03G28841No description available.Gm03+View
GM18G12770No description available.Gm18-View
GM02G12950No description available.Gm02+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR08G19850No description available.Chr08+View
GR08G15930No description available.Chr08+View
GR06G13460No description available.Chr06-View
GR08G17770No description available.Chr08-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ2G020870No description available.chr2-View
LJ4G029830No description available.chr4+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD06G016460No description available.6+View
MD17G012250No description available.17+View
MD09G011620No description available.9+View
MD13G004060No description available.13-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME08359G01710No description available.scaffold08359-View
ME06656G01200No description available.scaffold06656-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT4G109490carbohydrate-binding X8 domain proteinchr4+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS07G40940X8 domain containing protein, expressed7+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_007G06480No description available.scaffold_7+View
PPE_005G20760No description available.scaffold_5+View
PPE_001G29750No description available.scaffold_1+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT15G05780No description available.Chr15-View
PT12G06570No description available.Chr12+View
PT08G09530No description available.Chr08+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30174G05120No description available.30174-View
RC30138G01500No description available.30138-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL04G011720Glucan endo-1 3-beta-glucosidase 5 (AHRD V1 ***- B6UAM9_MAIZE)%3B contains Interpro domain(s) IPR013781 Glycoside hydrolase%2C subgroup%2C catalytic corech04-View
SL03G115200Glucan endo-1 3-beta-glucosidase 1 (AHRD V1 *-*- B6TW10_MAIZE)%3B contains Interpro domain(s) IPR012946 X8ch03-View
SL00G202560Beta-1 3-glucanase (AHRD V1 ***- Q8S2G6_ORYSJ)%3B contains Interpro domain(s) IPR000490 Glycoside hydrolase%2C family 17ch00+View
SL10G079860Beta-1 3-glucanase (AHRD V1 ***- Q68V46_OLEEU)%3B contains Interpro domain(s) IPR000490 Glycoside hydrolase%2C family 17ch10-View
SL07G008150Glucan endo-1 3-beta-glucosidase 7 (AHRD V1 ***- B6SUM3_MAIZE)%3B contains Interpro domain(s) IPR000490 Glycoside hydrolase%2C family 17ch07-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST10G021570Beta-1 3-glucanase (AHRD V1 ***- Q68V46_OLEEU); contains Interpro domain(s) IPR000490 Glycoside hydrolase, family 17chr10-View
ST07G008310Glucan endo-1 3-beta-glucosidase 7 (AHRD V1 ***- B6SUM3_MAIZE); contains Interpro domain(s) IPR000490 Glycoside hydrolase, family 17chr07+View
ST03G028700Glucan endo-1 3-beta-glucosidase 1 (AHRD V1 *-*- B6TW10_MAIZE); contains Interpro domain(s) IPR012946 X8chr03-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G15790No description available.scaffold_1-View
TC0005G14740No description available.scaffold_5-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G05330similar to AT3G57270|BG1 (BETA-1,3-GLUCANASE 1)ch5-1+View
TP1G16620similar to AT1G18650|PDCB3 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3)ch1-1-View
TP7G11880similar to AT4G14080|MEE48 (maternal effect embryo arrest 48)ch7-4-View
TP4G25060similar to AT2G42930|glycosyl hydrolase family protein 17ch4-6-View
TP2G24380similar to AT5G61130|PDCB1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 1)ch2-4-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV01G10380name=GSVIVG01012212001;chr1-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM07G20420glucan endo-1,3-beta-glucosidase, acidic isoform7-View
ZM05G05170glucan endo-1,3-beta-glucosidase 75-View
ZM07G23530hydrolase, hydrolyzing O-glycosyl compounds7+View
ZM02G36670No description available.2+View
ZM09G19660glucan endo-1,3-beta-glucosidase 49-View
ZM01G18300LOC1002834741-View


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Gene id
Species
Description
Chromosome
Strand