Gene: AT1G18650 (Arabidopsis thaliana)
Overview 
- Gene Identifier
- AT1G18650
- Transcript Identifier
- AT1G18650.1
- Gene Type
- Coding gene
- Location
- 1 : 6419036-6420413 : negative
Family
- Gene family
- Subfamily
- Duplication type
- Block duplicate
Descriptions
- Description
-
plasmodesmata callose-binding protein 3
- Curated Summary
-
Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose.
Identifiers
Identifier | Name |
---|---|
alias | plasmodesmata callose-binding protein 3 |
alias | PDCB3 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
- ...sequences.
- ...the multiple sequence alignment of the gene family with BioJS
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBIs protein database.
- ...the gene in Genomeview, a genome browser
- ...all colinear gene pairs.
Biological Process
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0005975 | IEA | PLAZA Homology | carbohydrate metabolic process | HOM03D000021 |
GO:0008152 | IEA | PLAZA Homology | metabolic process | HOM03D000021 |
GO:0071704 | IEA | PLAZA Homology | organic substance metabolic process | HOM03D000021 |
GO:0044238 | IEA | PLAZA Homology | primary metabolic process | HOM03D000021 |
Molecular Function
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0001872 | ISS | Gene Ontology | (1->3)-beta-D-glucan binding | 1 |
GO:0030247 | ISS | Gene Ontology | polysaccharide binding | 1 |
GO:0016787 | IEA | PLAZA Homology | hydrolase activity | HOM03D000021 |
GO:0016798 | IEA | PLAZA Homology | hydrolase activity, acting on glycosyl bonds | HOM03D000021 |
GO:0003824 | IEA | PLAZA Homology | catalytic activity | HOM03D000021 |
GO:0004553 | IEA | PLAZA Homology | hydrolase activity, hydrolyzing O-glycosyl compounds | HOM03D000021 |
Cellular Component
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0005886 | ISM | Gene Ontology | plasma membrane | 1 |
GO:0031225 | TAS | Gene Ontology | anchored to membrane | 1 |
GO:0009506 | IDA | Gene Ontology | plasmodesma | 1 |
Color Legend
Experimental Evidence |
Electronic Evidence |
Computational Reviewed Evidence |
Mapman id | Description |
---|---|
26.4 | misc.beta 1,3 glucan hydrolases |
SignalP | Description |
---|---|
SignalP-noTM | Signal Peptide detected using noTM network |