Expansion plot
Gene family finder
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Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- AL7G09870
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT2G24645 | Transcriptional factor B3 family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein (TAIR:AT4G00260.1). Transcriptional factor B3 family protein | 2 | - | View |
| AT4G31610 | REPRODUCTIVE MERISTEM 1 (REM1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein (TAIR:AT4G31630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). Expressed specifically in reproductive meristems, member of a moderately sized gene family distantly related to known plant DNA binding proteins Transcriptional factor B3 family protein | 4 | + | View |
Brassica rapa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BR04G14120 | No description available. | A04 | - | View |
| BR01G06080 | No description available. | A01 | - | View |
| BR09G43010 | No description available. | A09 | + | View |
| BR03G52440 | No description available. | A03 | - | View |
| BR08G15320 | No description available. | A08 | + | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_007G08400 | No description available. | scaffold_7 | + | View |
| CRU_004G03960 | No description available. | scaffold_4 | - | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL08G006190 | B3 domain-containing protein Os03g0212300 (AHRD V1 *-*- Y3123_ORYSJ)%3B contains Interpro domain(s) IPR003340 Transcriptional factor B3 | ch08 | + | View |
Solanum tuberosum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ST08G007290 | B3 domain-containing protein Os03g0212300 (AHRD V1 ***- Y3123_ORYSJ); contains Interpro domain(s) IPR003340 Transcriptional factor B3 | chr08 | + | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP4G03630 | similar to AT4G00260|MEE45 (maternal effect embryo arrest 45) | ch4-2 | - | View |
| TP7G29440 | similar to AT4G31610|REM1 (REPRODUCTIVE MERISTEM 1) | ch7-5 | + | View |