Gene: AT4G31610 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT4G31610
Transcript Identifier
AT4G31610.1
Gene Type
Coding gene
Location
4 : 15317700-15319776 : positive

Family

Gene family
HOM03D000700
(199 genes in 16 species)
specific family
Subfamily
ORTHO03D033959
(4 genes in 4 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

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Descriptions

Description
Transcriptional factor B3 family protein
Curated Summary
Expressed specifically in reproductive meristems, member of a moderately sized gene family distantly related to known plant DNA binding proteins
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Identifiers

Identifier Name
aliasREM1
aliasATREM1
aliasREPRODUCTIVE MERISTEM 1
uniprotQ84J39

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEA, ISSUniProtregulation of transcription, DNA-dependent1 2 3 4 5
GO:0009908IEPUniProtflower development1 2 3 4 5
GO:0006351IEAUniProttranscription, DNA-templated1 2 3 4
GO:0009793ISOPLAZA Tree-based Orthologyembryo development ending in seed dormancyAT4G00260

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEA, ISSUniProtDNA binding1 2 3 4 5
GO:0003700ISSGene Ontologysequence-specific DNA binding transcription factor activity1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IDA, ISM, UniProtnucleus1 2 3 4 5 6
GO:0009941ISOPLAZA Tree-based Orthologychloroplast envelopeAT4G31690

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR015300DNA-binding pseudobarrel domain
IPR003340B3 DNA binding domain

Mapman id Description
27.3.41RNA.regulation of transcription.B3 transcription factor family
No SignalP domains detected for this gene.

Binding sites bound by this Transcription Factor

Binding siteNameDescriptionCounts
Matrix_367REM1Not available327 genes in 10 species
Matrix_393REM1Not available304 genes in 10 species

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DatabaseType
PlnTFDBABI3VP1
PlantTFDBB3