Anchorpoints

Gene id
AL6G22390
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL5G12780No description available.scaffold_5+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G22760PHD finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DDT domain (InterPro:IPR004022), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Zinc finger, PHD-type (InterPro:IPR001965), DDT domain superfamily (InterPro:IPR018501), DDT domain, subgroup (InterPro:IPR018500), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: metalloendopeptidases;zinc ion binding;DNA binding (TAIR:AT5G35210.2); Has 3640 Blast hits to 3265 proteins in 204 species: Archae - 0; Bacteria - 0; Metazoa - 2369; Fungi - 398; Plants - 598; Viruses - 0; Other Eukaryotes - 275 (source: NCBI BLink). PHD finger family protein5+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR02G11260No description available.A02+View
BR03G09710No description available.A03+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV9G08380No description available.Bvchr9.sca023-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL02G21900No description available.Chr2-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00047G03400No description available.CM3.5_scaffold00047+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00047G00580No description available.supercontig_47+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_005G09880No description available.scaffold_5+View
CRU_006G19870No description available.scaffold_6+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00371G00080No description available.scaffold00371+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0010G03660No description available.scaffold_10-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM17G05400No description available.Gm17+View
GM12G30530No description available.Gm12-View
GM12G08950No description available.Gm12-View
GM11G19530No description available.Gm11+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR06G10860No description available.Chr06-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ3G043180No description available.chr3+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD11G011780No description available.11+View
MD03G010490No description available.3-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME08316G00840No description available.scaffold08316-View
ME05859G00170No description available.scaffold05859-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT2G084615DNA-binding and zinc-finger proteinchr2-View
MT4G055910DDT domain proteinchr4-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS11G05130PHD-finger family protein, expressed11-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_006G11530No description available.scaffold_6-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT04G18960No description available.Chr04+View
PT09G15020No description available.Chr09+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29991G00130No description available.29991-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL11G066780Chromodomain helicase DNA binding protein 3 (Fragment) (AHRD V1 *--- B1AR16_MOUSE)%3B contains Interpro domain(s) IPR018500 DDT subgroupch11-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST11G024600Chromodomain helicase DNA binding protein 5 (AHRD V1 *--* A2A8L1_MOUSE); contains Interpro domain(s) IPR018500 DDT subgroupchr11-View
ST06G031040Chromodomain helicase DNA binding protein 5 (AHRD V1 *--* A2A8L1_MOUSE); contains Interpro domain(s) IPR019787 Zinc finger, PHD-fingerchr06-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0009G28830No description available.scaffold_9+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP6G22660similar to AT5G22760|PHD finger family proteinch6-6-View
TP5G16400similar to AT5G22760|PHD finger family proteinch5-1-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV06G08430name=GSVIVG01031411001;chr6-View


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Gene id
Species
Description
Chromosome
Strand