Anchorpoints
- Gene id
- AL6G22390
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT5G22760 | PHD finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DDT domain (InterPro:IPR004022), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Zinc finger, PHD-type (InterPro:IPR001965), DDT domain superfamily (InterPro:IPR018501), DDT domain, subgroup (InterPro:IPR018500), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: metalloendopeptidases;zinc ion binding;DNA binding (TAIR:AT5G35210.2); Has 3640 Blast hits to 3265 proteins in 204 species: Archae - 0; Bacteria - 0; Metazoa - 2369; Fungi - 398; Plants - 598; Viruses - 0; Other Eukaryotes - 275 (source: NCBI BLink). PHD finger family protein | 5 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR02G11260 | No description available. | A02 | + | View |
BR03G09710 | No description available. | A03 | + | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV9G08380 | No description available. | Bvchr9.sca023 | - | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL02G21900 | No description available. | Chr2 | - | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00047G03400 | No description available. | CM3.5_scaffold00047 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00047G00580 | No description available. | supercontig_47 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_005G09880 | No description available. | scaffold_5 | + | View |
CRU_006G19870 | No description available. | scaffold_6 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00371G00080 | No description available. | scaffold00371 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0010G03660 | No description available. | scaffold_10 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM17G05400 | No description available. | Gm17 | + | View |
GM12G30530 | No description available. | Gm12 | - | View |
GM12G08950 | No description available. | Gm12 | - | View |
GM11G19530 | No description available. | Gm11 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR06G10860 | No description available. | Chr06 | - | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ3G043180 | No description available. | chr3 | + | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD11G011780 | No description available. | 11 | + | View |
MD03G010490 | No description available. | 3 | - | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME08316G00840 | No description available. | scaffold08316 | - | View |
ME05859G00170 | No description available. | scaffold05859 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT2G084615 | DNA-binding and zinc-finger protein | chr2 | - | View |
MT4G055910 | DDT domain protein | chr4 | - | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS11G05130 | PHD-finger family protein, expressed | 11 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_006G11530 | No description available. | scaffold_6 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT04G18960 | No description available. | Chr04 | + | View |
PT09G15020 | No description available. | Chr09 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC29991G00130 | No description available. | 29991 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL11G066780 | Chromodomain helicase DNA binding protein 3 (Fragment) (AHRD V1 *--- B1AR16_MOUSE)%3B contains Interpro domain(s) IPR018500 DDT subgroup | ch11 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST11G024600 | Chromodomain helicase DNA binding protein 5 (AHRD V1 *--* A2A8L1_MOUSE); contains Interpro domain(s) IPR018500 DDT subgroup | chr11 | - | View |
ST06G031040 | Chromodomain helicase DNA binding protein 5 (AHRD V1 *--* A2A8L1_MOUSE); contains Interpro domain(s) IPR019787 Zinc finger, PHD-finger | chr06 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0009G28830 | No description available. | scaffold_9 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP6G22660 | similar to AT5G22760|PHD finger family protein | ch6-6 | - | View |
TP5G16400 | similar to AT5G22760|PHD finger family protein | ch5-1 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV06G08430 | name=GSVIVG01031411001; | chr6 | - | View |