Anchorpoints

Gene id
AL5G00110
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL1G15930No description available.scaffold_1-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G15100RING-H2 finger A2A (RHA2A); FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; INVOLVED IN: response to salt stress, positive regulation of abscisic acid mediated signaling pathway, regulation of response to osmotic stress; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-H2 finger protein 2B (TAIR:AT2G01150.1); Has 8620 Blast hits to 8597 proteins in 260 species: Archae - 0; Bacteria - 0; Metazoa - 2194; Fungi - 672; Plants - 4576; Viruses - 12; Other Eukaryotes - 1166 (source: NCBI BLink). RING-H2 finger A2A Encodes a putative RING-H2 finger protein RHA2a.1-View
AT2G01150RING-H2 finger protein 2B RING-H2 finger protein 2B (RHA2B); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-H2 finger A2A (TAIR:AT1G15100.1); Has 8536 Blast hits to 8514 proteins in 269 species: Archae - 0; Bacteria - 0; Metazoa - 2151; Fungi - 713; Plants - 4534; Viruses - 16; Other Eukaryotes - 1122 (source: NCBI BLink). Encodes a RING-H2 finger protein that is expressed in vascular tissue, root tips, embryos and pistils.2+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR06G35780No description available.A06-View
BR06G10510No description available.A06-View
BR09G22050No description available.A09-View
BR08G02080No description available.A08+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL01G05790No description available.Chr1-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00065G00790No description available.supercontig_65-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_001G14220No description available.scaffold_1-View
CRU_005G00110No description available.scaffold_5+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00008G00040No description available.scaffold00008+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV0G00710RING-H2 zinc finger protein RHA2a (similar to)scf0513158+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM20G25761No description available.Gm20-View
GM10G41480No description available.Gm10+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD16G001030No description available.16+View
MD13G002170No description available.13+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME03264G00380No description available.scaffold03264+View
ME03604G00380No description available.scaffold03604+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G32860No description available.scaffold_1-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT10G11800No description available.Chr10+View
PT08G12570No description available.Chr08-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL05G008640RING finger protein (AHRD V1 *-*- Q22V07_TETTH)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-typech05+View
SL04G007500RING finger protein (AHRD V1 ***- Q22V07_TETTH)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-typech04-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST05G009090E3 ubiquitin-protein ligase Os03g0188200 (AHRD V1 *-** ATL31_ORYSJ); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-typechr05-View
ST04G006240Ubiquitin-protein ligase E3 (AHRD V1 *--* B6K563_SCHJY); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-typechr04+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP2G12620similar to AT2G01150|RHA2B (RING-H2 FINGER PROTEIN 2B)ch2-4+View


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Gene id
Species
Description
Chromosome
Strand