Anchorpoints
- Gene id
- AL5G00110
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G15100 | RING-H2 finger A2A (RHA2A); FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; INVOLVED IN: response to salt stress, positive regulation of abscisic acid mediated signaling pathway, regulation of response to osmotic stress; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-H2 finger protein 2B (TAIR:AT2G01150.1); Has 8620 Blast hits to 8597 proteins in 260 species: Archae - 0; Bacteria - 0; Metazoa - 2194; Fungi - 672; Plants - 4576; Viruses - 12; Other Eukaryotes - 1166 (source: NCBI BLink). RING-H2 finger A2A Encodes a putative RING-H2 finger protein RHA2a. | 1 | - | View |
AT2G01150 | RING-H2 finger protein 2B RING-H2 finger protein 2B (RHA2B); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-H2 finger A2A (TAIR:AT1G15100.1); Has 8536 Blast hits to 8514 proteins in 269 species: Archae - 0; Bacteria - 0; Metazoa - 2151; Fungi - 713; Plants - 4534; Viruses - 16; Other Eukaryotes - 1122 (source: NCBI BLink). Encodes a RING-H2 finger protein that is expressed in vascular tissue, root tips, embryos and pistils. | 2 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR06G35780 | No description available. | A06 | - | View |
BR06G10510 | No description available. | A06 | - | View |
BR09G22050 | No description available. | A09 | - | View |
BR08G02080 | No description available. | A08 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL01G05790 | No description available. | Chr1 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00065G00790 | No description available. | supercontig_65 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_001G14220 | No description available. | scaffold_1 | - | View |
CRU_005G00110 | No description available. | scaffold_5 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00008G00040 | No description available. | scaffold00008 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV0G00710 | RING-H2 zinc finger protein RHA2a (similar to) | scf0513158 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM20G25761 | No description available. | Gm20 | - | View |
GM10G41480 | No description available. | Gm10 | + | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD16G001030 | No description available. | 16 | + | View |
MD13G002170 | No description available. | 13 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME03264G00380 | No description available. | scaffold03264 | + | View |
ME03604G00380 | No description available. | scaffold03604 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_001G32860 | No description available. | scaffold_1 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT10G11800 | No description available. | Chr10 | + | View |
PT08G12570 | No description available. | Chr08 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL05G008640 | RING finger protein (AHRD V1 *-*- Q22V07_TETTH)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-type | ch05 | + | View |
SL04G007500 | RING finger protein (AHRD V1 ***- Q22V07_TETTH)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-type | ch04 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST05G009090 | E3 ubiquitin-protein ligase Os03g0188200 (AHRD V1 *-** ATL31_ORYSJ); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-type | chr05 | - | View |
ST04G006240 | Ubiquitin-protein ligase E3 (AHRD V1 *--* B6K563_SCHJY); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-type | chr04 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP2G12620 | similar to AT2G01150|RHA2B (RING-H2 FINGER PROTEIN 2B) | ch2-4 | + | View |