Gene: AL5G00110 (Arabidopsis lyrata)

Overview top

Gene Identifier
AL5G00110
Transcript Identifier
AL5G00110.1
Gene Type
Coding gene
Location
scaffold_5 : 111321-111776 : positive

Family

Gene family
HOM03D000334
(353 genes in 30 species)
specific family
Subfamily
ORTHO03D047313
(3 genes in 3 species)
specific family
Duplication type
Block duplicate

Loading...please wait

Descriptions

Description (AnnoMine)
Probable E3 ubiquitin-protein ligase RHA2B
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pid484022
GeneNameg484022
idPAC:16051562

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0080167ISOPLAZA Integrative Orthologyresponse to karrikinAT2G01150

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0008270IEAInterProzinc ion binding
GO:0004842ISOPLAZA Integrative Orthologyubiquitin-protein ligase activityAT2G01150
GO:0043169IEAPLAZA Homologycation bindingHOM03D000334
GO:0046914IEAPLAZA Homologytransition metal ion bindingHOM03D000334
GO:0046872IEAPLAZA Homologymetal ion bindingHOM03D000334

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001841Zinc finger, RING-type
IPR013083Zinc finger, RING/FYVE/PHD-type

Mapman id Description
29.5.11.4.2protein.degradation.ubiquitin.E3.RING
No SignalP domains detected for this gene.