Anchorpoints

Gene id
AL1G15250
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL5G01660No description available.scaffold_5+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G02470alfin-like 6 Encodes a member of the Alfin1-like family of nuclear-localized PHD (plant homeodomain) domain containing proteins that acts as a novel upstream regulator of root hair formation during Pi starvation. All AL proteins except AL3 bind to di- or trimethylated histone H3 (H3K4me3/2). Members of this family include: AT5G05610 (AL1), AT3G11200 (AL2), AT3G42790 (AL3), AT5G26210 (AL4), AT5G20510 (AL5), AT2G02470 (AL6), AT1G14510 (AL7). alfin-like 6 (AL6); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF3594 (InterPro:IPR021998), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: alfin-like 7 (TAIR:AT1G14510.1); Has 1820 Blast hits to 1777 proteins in 193 species: Archae - 0; Bacteria - 0; Metazoa - 798; Fungi - 350; Plants - 563; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink).2+View
AT1G14510alfin-like 7 (AL7); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Protein of unknown function DUF3594 (InterPro:IPR021998), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: alfin-like 6 (TAIR:AT2G02470.1); Has 1825 Blast hits to 1776 proteins in 181 species: Archae - 0; Bacteria - 0; Metazoa - 841; Fungi - 323; Plants - 580; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). Encodes a member of the Alfin1-like family of nuclear-localized PHD (plant homeodomain) domain containing proteins. All AL proteins except AL3 bind to di- or trimethylated histone H3 (H3K4me3/2). Members of this family include: AT5G05610 (AL1), AT3G11200 (AL2), AT3G42790 (AL3), AT5G26210 (AL4), AT5G20510 (AL5), AT2G02470 (AL6), AT1G14510 (AL7). alfin-like 71-View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00099G01490No description available.scaffold00099-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR08G27460No description available.A08+View
BR06G10060No description available.A06-View
BR09G48180No description available.A09+View
BR09G21550No description available.A09-View
BR06G34930No description available.A06-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_005G01380No description available.scaffold_5+View
CRU_001G13590No description available.scaffold_1-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0007G00410No description available.scaffold_7-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV5G27050PHD finger protein At5g26210 (similar to)LG5-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM17G00630No description available.Gm17-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD08G023120No description available.8-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT4G134510PHD finger alfin-like proteinchr4+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS11G14010PHD finger protein, putative, expressed PHD finger protein ALFIN-LIKE 811-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G52950No description available.scaffold_1+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT04G23050No description available.Chr04-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30063G00180No description available.30063-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL01G102750PHD finger family protein (AHRD V1 **-- D7KBK9_ARALY)%3B contains Interpro domain(s) IPR019787 Zinc finger%2C PHD-fingerch01+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP2G13700similar to AT2G02470|AL6 (ALFIN-LIKE 6)ch2-4+View
TP1G12870similar to AT1G14510|AL7 (ALFIN-LIKE 7)ch1-1-View


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Gene id
Species
Description
Chromosome
Strand