Gene: PPE_001G52950 (Prunus persica)

Overview top

Gene Identifier
PPE_001G52950
Transcript Identifier
PPE_001G52950.1
Gene Type
Coding gene
Location
scaffold_1 : 42167552-42172127 : positive

Family

Gene family
HOM03D000482
(266 genes in 31 species)
specific family
Subfamily
ORTHO03D008141
(30 genes in 23 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
PHD finger protein ALFIN-LIKE
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidppa010294m
idPAC:17652381

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0055114IEAGenome Projectoxidation-reduction process
GO:0006355IEAInterProregulation of transcription, DNA-dependent
GO:0055065ISOPLAZA Integrative Orthologymetal ion homeostasisAT2G02470
GO:0048767ISOPLAZA Integrative Orthologyroot hair elongationAT2G02470
GO:0016036ISOPLAZA Integrative Orthologycellular response to phosphate starvationAT2G02470
GO:0010468IEAPLAZA Homologyregulation of gene expressionHOM03D000482
GO:0051171IEAPLAZA Homologyregulation of nitrogen compound metabolic processHOM03D000482
GO:0051252IEAPLAZA Homologyregulation of RNA metabolic processHOM03D000482
GO:0019222IEAPLAZA Homologyregulation of metabolic processHOM03D000482
GO:0019219IEAPLAZA Homologyregulation of nucleobase-containing compound metabolic processHOM03D000482
GO:0050789IEAPLAZA Homologyregulation of biological processHOM03D000482
GO:0009889IEAPLAZA Homologyregulation of biosynthetic processHOM03D000482
GO:0018130IEAPLAZA Homologyheterocycle biosynthetic processHOM03D000482
GO:0019438IEAPLAZA Homologyaromatic compound biosynthetic processHOM03D000482
GO:0016070IEAPLAZA HomologyRNA metabolic processHOM03D000482
GO:0044271IEAPLAZA Homologycellular nitrogen compound biosynthetic processHOM03D000482
GO:0010556IEAPLAZA Homologyregulation of macromolecule biosynthetic processHOM03D000482
GO:0032774IEAPLAZA HomologyRNA biosynthetic processHOM03D000482
GO:0080090IEAPLAZA Homologyregulation of primary metabolic processHOM03D000482
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03D000482
GO:2000112IEAPLAZA Homologyregulation of cellular macromolecule biosynthetic processHOM03D000482
GO:0006351IEAPLAZA Homologytranscription, DNA-templatedHOM03D000482
GO:0060255IEAPLAZA Homologyregulation of macromolecule metabolic processHOM03D000482
GO:0031323IEAPLAZA Homologyregulation of cellular metabolic processHOM03D000482
GO:0031326IEAPLAZA Homologyregulation of cellular biosynthetic processHOM03D000482
GO:1901362IEAPLAZA Homologyorganic cyclic compound biosynthetic processHOM03D000482
GO:0034654IEAPLAZA Homologynucleobase-containing compound biosynthetic processHOM03D000482
GO:0050794IEAPLAZA Homologyregulation of cellular processHOM03D000482

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAGenome Projectprotein binding
GO:0047134IEAGenome Projectprotein-disulfide reductase activity
GO:0042393IEAInterProhistone binding
GO:0008270IEAInterProzinc ion binding
GO:0035064ISOPLAZA Integrative Orthologymethylated histone residue bindingAT1G14510

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISOPLAZA Integrative OrthologynucleusAT2G02470 AT1G14510
GO:0005829ISOPLAZA Integrative OrthologycytosolAT2G02470

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001965Zinc finger, PHD-type
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR019787Zinc finger, PHD-finger
IPR021998Alfin
IPR019786Zinc finger, PHD-type, conserved site
IPR011011Zinc finger, FYVE/PHD-type

Mapman id Description
27.3.2RNA.regulation of transcription.Alfin-like
No SignalP domains detected for this gene.