Anchorpoints

Gene id
AL1G01770
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL6G39410No description available.scaffold_6+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G02075pitchoun 1 (PIT1); FUNCTIONS IN: zinc ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G02610.1); Has 1559 Blast hits to 1554 proteins in 183 species: Archae - 0; Bacteria - 0; Metazoa - 678; Fungi - 105; Plants - 585; Viruses - 28; Other Eukaryotes - 163 (source: NCBI BLink). RING/FYVE/PHD zinc finger superfamily protein4-View
AT1G02610RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT4G02075.1); Has 1637 Blast hits to 1605 proteins in 173 species: Archae - 0; Bacteria - 0; Metazoa - 761; Fungi - 107; Plants - 616; Viruses - 18; Other Eukaryotes - 135 (source: NCBI BLink). RING/FYVE/PHD zinc finger superfamily protein1-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR10G05420No description available.A10+View
BR09G00700No description available.A09+View
BR08G32000No description available.A08+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL10G09620No description available.Chr10+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00031G03970No description available.CM3.5_scaffold00031-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00018G00290No description available.supercontig_18+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_006G33930No description available.scaffold_6+View
CRU_001G01500No description available.scaffold_1-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00001G06710No description available.scaffold00001-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0008G09050No description available.scaffold_8-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV5G34980E3 ubiquitin-protein ligase MARCH2 (MARCH-II) (probable)LG5+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM19G40340No description available.Gm19+View
GM02G01630No description available.Gm02-View
GM04G26831No description available.Gm04+View
GM10G01680No description available.Gm10-View
GM03G37740No description available.Gm03+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR08G14010No description available.Chr08-View
GR07G12320No description available.Chr07-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ1G070850No description available.chr1-View
LJ5G027580No description available.chr5+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD03G025070No description available.3-View
MD11G028840No description available.11-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME07301G00300No description available.scaffold07301+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT7G109460RING/FYVE/PHD zinc finger proteinchr7+View
MT1G087150RING/FYVE/PHD zinc finger proteinchr1-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS01G19800zinc finger, C3HC4 type, putative, expressed1-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_008G28330No description available.scaffold_8+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT02G19660No description available.Chr02-View
PT14G12190No description available.Chr14-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30076G02300No description available.30076-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL01G079530E3 ubiquitin-protein ligase MARCH6 (AHRD V1 *--- C1HD92_PARBA)%3B contains Interpro domain(s) IPR011016 Zinc finger%2C RING-CH-typech01-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G31070No description available.scaffold_1+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP6G01960similar to AT4G02075|PIT1 (pitchoun 1)ch6-1-View
TP1G01610similar to AT4G02075|PIT1 (pitchoun 1)ch1-1-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV07G09170name=GSVIVG01028110001;chr7+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM08G07370No description available.8+View
ZM03G10790PIT13-View


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Gene id
Species
Description
Chromosome
Strand