Anchorpoints
- Gene id
- AL1G01770
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT4G02075 | pitchoun 1 (PIT1); FUNCTIONS IN: zinc ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G02610.1); Has 1559 Blast hits to 1554 proteins in 183 species: Archae - 0; Bacteria - 0; Metazoa - 678; Fungi - 105; Plants - 585; Viruses - 28; Other Eukaryotes - 163 (source: NCBI BLink). RING/FYVE/PHD zinc finger superfamily protein | 4 | - | View |
AT1G02610 | RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT4G02075.1); Has 1637 Blast hits to 1605 proteins in 173 species: Archae - 0; Bacteria - 0; Metazoa - 761; Fungi - 107; Plants - 616; Viruses - 18; Other Eukaryotes - 135 (source: NCBI BLink). RING/FYVE/PHD zinc finger superfamily protein | 1 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR10G05420 | No description available. | A10 | + | View |
BR09G00700 | No description available. | A09 | + | View |
BR08G32000 | No description available. | A08 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL10G09620 | No description available. | Chr10 | + | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00031G03970 | No description available. | CM3.5_scaffold00031 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00018G00290 | No description available. | supercontig_18 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_006G33930 | No description available. | scaffold_6 | + | View |
CRU_001G01500 | No description available. | scaffold_1 | - | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00001G06710 | No description available. | scaffold00001 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0008G09050 | No description available. | scaffold_8 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV5G34980 | E3 ubiquitin-protein ligase MARCH2 (MARCH-II) (probable) | LG5 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM19G40340 | No description available. | Gm19 | + | View |
GM02G01630 | No description available. | Gm02 | - | View |
GM04G26831 | No description available. | Gm04 | + | View |
GM10G01680 | No description available. | Gm10 | - | View |
GM03G37740 | No description available. | Gm03 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR08G14010 | No description available. | Chr08 | - | View |
GR07G12320 | No description available. | Chr07 | - | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ1G070850 | No description available. | chr1 | - | View |
LJ5G027580 | No description available. | chr5 | + | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD03G025070 | No description available. | 3 | - | View |
MD11G028840 | No description available. | 11 | - | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME07301G00300 | No description available. | scaffold07301 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT7G109460 | RING/FYVE/PHD zinc finger protein | chr7 | + | View |
MT1G087150 | RING/FYVE/PHD zinc finger protein | chr1 | - | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS01G19800 | zinc finger, C3HC4 type, putative, expressed | 1 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_008G28330 | No description available. | scaffold_8 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT02G19660 | No description available. | Chr02 | - | View |
PT14G12190 | No description available. | Chr14 | - | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC30076G02300 | No description available. | 30076 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL01G079530 | E3 ubiquitin-protein ligase MARCH6 (AHRD V1 *--- C1HD92_PARBA)%3B contains Interpro domain(s) IPR011016 Zinc finger%2C RING-CH-type | ch01 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0001G31070 | No description available. | scaffold_1 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP6G01960 | similar to AT4G02075|PIT1 (pitchoun 1) | ch6-1 | - | View |
TP1G01610 | similar to AT4G02075|PIT1 (pitchoun 1) | ch1-1 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV07G09170 | name=GSVIVG01028110001; | chr7 | + | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM08G07370 | No description available. | 8 | + | View |
ZM03G10790 | PIT1 | 3 | - | View |