Expansion plot
Gene family finder
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Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- AL0G04050
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT4G12860 | unfertilized embryo sac 14 (UNE14); FUNCTIONS IN: calcium ion binding; INVOLVED IN: double fertilization forming a zygote and endosperm; LOCATED IN: cytoplasm; EXPRESSED IN: leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Parvalbumin (InterPro:IPR008080), EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 11 (TAIR:AT3G07490.1); Has 24675 Blast hits to 17481 proteins in 1590 species: Archae - 2; Bacteria - 226; Metazoa - 10763; Fungi - 4223; Plants - 5412; Viruses - 0; Other Eukaryotes - 4049 (source: NCBI BLink). EF hand calcium-binding protein family | 4 | - | View |
Brassica rapa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BR04G07360 | No description available. | A04 | + | View |
| BR08G06160 | No description available. | A08 | - | View |
Beta vulgaris
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BV5G11570 | No description available. | Bvchr5.sca024 | + | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00008G00540 | No description available. | supercontig_8 | - | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_003G06710 | No description available. | scaffold_3 | + | View |
| CRU_007G28700 | No description available. | scaffold_7 | + | View |
Eucalyptus grandis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| EG0008G06110 | No description available. | scaffold_8 | - | View |
Gossypium raimondii
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GR01G22790 | No description available. | Chr01 | - | View |
| GR00G00850 | No description available. | scaffold_14 | + | View |
| GR07G16050 | No description available. | Chr07 | + | View |
Malus domestica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MD10G010840 | No description available. | 10 | - | View |
Ricinus communis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| RC30178G00220 | No description available. | 30178 | + | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL06G083000 | Calmodulin-like protein (AHRD V1 ***- Q6RZU7_MUSAC)%3B contains Interpro domain(s) IPR011992 EF-Hand type | ch06 | - | View |
Solanum tuberosum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ST06G035450 | Calmodulin-like protein (AHRD V1 ***- Q6RZU7_MUSAC); contains Interpro domain(s) IPR011992 EF-Hand type | chr06 | - | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP3G06400 | similar to AT3G07490|AGD11 (ARF-GAP domain 11) | ch3-1 | + | View |
| TP7G09590 | similar to AT4G12860|UNE14 (unfertilized embryo sac 14) | ch7-4 | - | View |