Matrix_104 | PI | Not available | Upstream | -171 |
Matrix_108 | PIF4 | Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses | Upstream | -171 |
Matrix_109 | GBF3 | Not available | Upstream | -171 |
| | | Upstream | -169 |
Matrix_113 | ABI5 | Not available | Upstream | -1568 |
Matrix_118 | PIF3_2 | Direct targeting of light signals to a promoter element-bound transcription factor | Upstream | -174 |
| | | Upstream | -173 |
Matrix_122 | ABF1;AREB2 | Not available | Upstream | -1568 |
Matrix_129 | ABF1 | Not available | Upstream | -170 |
Matrix_134 | ABF1 | Not available | Upstream | -1566 |
Matrix_145 | GBF4;AT5G44080 | Not available | Upstream | -169 |
Matrix_147 | ERF3;AT1G80580 | Not available | Upstream | -49 |
Matrix_156 | POC1 | Not available | Upstream | -171 |
| | | Upstream | -169 |
Matrix_192 | FHY3/FAR1 | Not available | Upstream | -1570 |
Matrix_214 | AP1 | Not available | Upstream | -172 |
Matrix_224 | ERF1 | Not available | Upstream | -50 |
Matrix_233 | MYC3 | Not available | Upstream | -169 |
Matrix_243 | RAP2.12;RAP2.2 | Not available | Upstream | -50 |
Matrix_247 | PIF3 | Not available | Upstream | -170 |
Matrix_264 | ATAREB1 | Not available | Upstream | -1570 |
Matrix_287 | ERF2 | Not available | Upstream | -51 |
Matrix_300 | bZIP68;bZIP16 | Not available | Upstream | -170 |
| | | Upstream | -169 |
Matrix_305 | PIF4 | Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses | Upstream | -172 |
Matrix_331 | GBF1 | Not available | Upstream | -171 |
| | | Upstream | -169 |
Matrix_332 | SPT;ALC | Not available | Upstream | -170 |
| | | Upstream | -169 |
Matrix_334 | AT3G23230 | Not available | Upstream | -50 |
Matrix_345 | POC1 | Not available | Upstream | -174 |
| | | Upstream | -173 |
Matrix_356 | PRR5 | Not available | Upstream | -1570 |
Matrix_374 | AT5G07580;AT5G61590 | Not available | Upstream | -50 |
Matrix_403 | BZR1 | Not available | Upstream | -172 |
Matrix_438 | AtbZIP63 | Not available | Upstream | -1938 |
Matrix_443 | AGL15 | Not available | Upstream | -172 |
Matrix_484 | ATERF13 | Not available | Upstream | -49 |
Matrix_50 | ATERF14;AT5G43410 | Not available | Upstream | -50 |
Matrix_517 | ERF12 | Not available | Upstream | -49 |
Matrix_55 | PIF3 | Not available | Upstream | -171 |
Matrix_64 | PIF5 | Not available | Upstream | -169 |
Matrix_77 | PRR5 | Not available | Upstream | -1569 |
Motif_179 | CACGTGMOTIF;BES1;PIF4;PIF5 | Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling;A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana; CACGTG motif; G-box; Binding site of Arabidopsis GBF4; C. roseus G-box binding factor 1 (CrGBF1) and 1 (CrGBF2) can act as transcriptional repressors of the Str promoter via direct interaction with the G-box; Essential for expression of beta-phaseolin gene during embryogenesis in bean, tobacco, Arabidopsis; Tomato Pti4 (ERF) regulates defense-related gene expression via GCC box and non-GCC box cis-element (Myb1 (GTTAGTT) and G-box (CACGTG)); Isolation and characterization of a fourth Arabidopsis thaliana G-box-binding factor, which has similarities to Fos oncoprotein; Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses | Upstream | -168 |
Motif_193 | GLK1 | GLK transcription factors coordinate expression of the photosynthetic apparatus in Arabidopsis | Upstream | -214 |
Motif_194 | EBOXBNNAPA | E-box of napA storage-protein gene of Brassica napus;This sequence is also known as RRE (R response element); MYC recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; Binding site of ATMYC2 (previously known as rd22BP1); see E-box and MYCATRD22; MYC recognition sequence in CBF3 promoter; Binding site of ICE1 (inducer of CBF expression 1) that regulates the transcription of CBF/DREB1 genes in the cold in Arabidopsis; ICE1 | Upstream | -168 |
Motif_207 | MAMMALENHAN | Core sequence in enhancers from polyoma virus and from the IgM heavy chain gene | Upstream | -316 |
Motif_218 | ABRERATCAL | ABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABRE | Upstream | -169 |
| | | Upstream | -168 |
Motif_244 | ABRE-like binding site motif | Not available | Upstream | -170 |
| | | Upstream | -168 |
Motif_313 | ERF1 BS in AtCHI-B | Core of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperature | Upstream | -48 |
Motif_318 | CGCGBOXAT | CGCG box recognized by AtSR1-6 (Arabidopsis thaliana signal-responsive genes); Multiple CGCG elements are found in promoters of many genes; Ca2+/calmodulin binds to all AtSRs | Upstream | -229 |
Motif_339 | ABRE-like binding site motif | Molecular responses to dehydration and low temperature | Upstream | -168 |
Motif_448 | IRO2OS | OsIRO2-binding core sequence; G-box plus G; Transcription factor OsIRO2 is induced exclusively by Fe deficiency | Upstream | -169 |
| | | Upstream | -168 |
Motif_473 | ABREOSRGA1 | ABRE (ABA responsive element) in rice RGA1 encoding a G protein alpha subunit;ABRE; ABA and water-stress responses; Found in maize rab28; maize rab28 is ABA-inducible in embryos and vegetative tissues; Found in the Arabidopsis (A.t.) alcohol dehydrogenase (Adh) gene promoter; ABRE2; Found in the maize (Z.m.) Cat1 gene promoter; Responsible for the induction by ABA; Binding site of CBF2; Arabidopsis CBF1 overexpression induces COR genes and enhances freezing tolerance; The CBF genes do not appear to be autoregulated through the CRT/DRE sequence;The cis-regulatory element CCACGTGG is involved in ABA and water-stress responses of the maize gene rab28. Characterization of a maize G-box binding factor that is induced by hypoxia | Upstream | -169 |
Motif_511 | RYREPEATGMGY2 | RY repeat motif (CATGCAT); Present in the 5' region of the soybean glycinin gene (Gy2) | Upstream | -1654 |
Motif_627 | ACGTABREMOTIFA2OSEM | Experimentally determined sequence requirement of ACGT-core of motif A in ABRE of the rice gene, OSEM; DRE and ABRE are interdependent in the ABA-responsive expression of the rd29A in Arabidopsis | Upstream | -1567 |
Motif_72 | GADOWNAT | Sequence present in 24 genes in the GA-down regulated d1 cluster (106 genes) found in Arabidopsis seed germination; This motif is similar to ABRE | Upstream | -1567 |
Motif_79 | UPRMOTIFIIAT | Motif II in the conserved UPR (unfolded protein response) cis-acting element in Arabidopsis genes coding for SAR1B, HSP-90, SBR-like, Ca-ATPase 4, CNX1, PDI, etc | Upstream | -183 |