PLAZA 3.0 Dicots : Binding Sites

Binding sites with simlar sequences

Binding site: Motif_280
Name: OCSELEMENTAT
Description: OCS element in octopine synthase gene (OCS) of Ti-plasmid of Agrobacterium; Binding with nuclear protein isolated from tobacco; See OCS motif; ocs-like element; Also found in Arabidopsis glutathione S-transferase gene (GST6); OBF (ocs element binding factor)-binding site; See S000346; Tandem OCSTF binding-sites are essential for the activity of the Ocs-element; The Ocs-element occures rarely in plant gene promoters

Sequence: TGACGYAAGSRMTKACGYMM
Positional Weight Matrix

Minimum similarity percentage

Binding site	Name	Description	Similarity
Motif_360	OCS promoter motif	The ocs-element is a component of the promoters of several T-DNA and plant viral genes	97.50%
Motif_548	SARECAMV	Salicylic acid responsive element found in CaMV 35S promoter; Identical to as-1; Binding with ASF-1 (Activation Sequence Factor-1); See AS1	75.00%
Motif_302	OCSGMHSP26A	Ocs element found in soybean (Glycine max) heat shock gene (Gmhsp26-A) promoter; The element is a functional ocs-element; The element did not affect the promoter's response to heat or wounding	73.17%
Motif_68	PASNTPARA	pas; as-1-related element found in the tobacco parA gene promoter; Involved in Cadmium responsiveness; Not related to copper responsiveness; Located between -68 and -49	68.17%
Motif_35	ASF1NTPARA	ASF-1 (as-1 binding nuclear factor) binding site found in tobacco parA gene; Found in auxin-responsive regions; as-1-like sequences in parA, parB and parC bind with ASF-1, ALF-2, and ALF-1, respectively; See ABFOS,ALF1NTPARC,ALF2NTPARB	65.67%
Motif_149	OCSENHANMOTIFAT	OCS enhancer element in octopine synthase gene (OCS) of Ti-plasmid of Agrobacterium tumefaciens; Binding with nuclear protein isolated from tobacco and maize; Tandem OCSTF binding-sites are essential for the activity of the Ocs-element; The Ocs-element occures rarely in plant gene promoters; OCS palindrome found in tobacco OCS (Octopine synthase gene) promoter; Located at -193 to -178; Binding site of ASF-1; Confers expression of the gene	65.00%
Motif_605	20NTNTNOS	20nt (20 nucleotide sequence) found in the promoter on tobacco nopalin synthase (nos) gene promoter; Containing two hexamer motifs (TGAGCT) and a spacer region; The spacer region between two hexamer motifs is essential; Important for the gene expression; Essential for response to wounding, auxin, MJ, and SA; Very similar to ASF-1 binding site	65.00%
Motif_81	ALF1NTPARC	ALF-1 (as-1-like sequence binding factor) binding site found in tobacco parC gene; Found in auxin-responsive regions; as-1-like sequences in parA, parB and parC bind with ASF-1, ALF-2, and ALF-1, respectively; See ABFOS	65.00%
Motif_678	ASF1ATNOS	Tobacco ASF-1 binding site in nopaline synthase (NOS) promoter of Ti-plasmid of Agrobacterium tumefaciens; From -131 to -111; Containing two hexamer motifs; Essential for the nos promoter activity	60.00%
Matrix_468	ATHB9	The Arabidopsis Athb-8, -9 and -14 genes are members of a small gene family coding for highly related HD-ZIP proteins	59.48%
Matrix_381	ATHB9	Not Available	59.48%
Matrix_459	ATHB9; CNA; PHB; ATHB-8; REV	Not Available	59.48%
Motif_3	ANAC059	ORS1, an H2O2-Responsive NAC Transcription Factor, Controls Senescence in Arabidopsis thaliana	56.74%
Motif_532	ANAC059	ORS1, an H2O2-Responsive NAC Transcription Factor, Controls Senescence in Arabidopsis thaliana	55.34%
Motif_664	C1GMAUX28	C1; DNase I protected sequence found in the soybean auxin responsive gene, Aux28, promoter; Located between -463 and -448; A/T-rich sequence	54.51%
Motif_346	SND1; VND6; VND7; NST1; NST2	Global analysis of direct targets of secondary wall NAC master switches in Arabidopsis	54.02%
Motif_303	VOZATVPP	VOZ-binding sequence found in the promoter of A. thaliana V-PPase (vacuolar H+-pyrophosphatase) gene; Involved in its expression during pollen development; one-zinc finger	53.74%
Motif_105	AGL3 binding site motif	The Arabidopsis MADS-box gene AGL3 is widely expressed and encodes a sequence-specific DNA-binding protein	51.46%
Motif_102	OCETYPEINTHISTONE	Type I element; Oct-containing composite element Type I found in tobacco histone gene promoter; Oct (octomer) motif is paired with Hex motif to form Type I element; Required for S-phase specific and meristematic tissue-specific expression	50.78%
Motif_506	IDRSZMFER1	IDRS (Iron-Dependent Regulatory Sequence) found in maize and Arabidopsis ferritin genes (Fer1); IDRS is responsible for transcriptional repression of ZmFer1 gene under low iron supply conditions; IDRS is not involved in the Fe-regulated expression of the AtAPX1 gene	50.67%
Motif_304	SRENTTTO1	Stress responsive element (SRE) in tobacco retrotransposon Tto1; A 13 bp cis-regulatory element in the LTR promoter of the tobacco retrotransposon Tto1; Involved in responsiveness to tissue culture, wounding, methyl jasmonate and fungal elicitors; Contains a conserved motif, Box L	50.67%