| Motif_25 | GLUTAACAOS | glutelin common motif; AACA motif; Conserved in all member of rice glutelin | | 66.67% |
| Motif_660 | GT-3b | Pathogen- and NaCl-induced expression of the SCaM-4 promoter is mediated in part by a GT-1 box that interacts with a GT-1-like transcription factor | | 60.00% |
| Motif_257 | BOX1PSGS2 | Box 1 element in pea glutamine synthetase (GS2) gene; An element in a 33-bp AT-rich sequence (box 1) of the 5' end of a GS2 promoter; Located at -837 to -827 of pea GS2; Multimer of box 1 element was used to isolate a cDNA encoding an AT-rich DNA binding protein (ATBP-1) | | 60.00% |
| Motif_540 | CCA1 motif1 BS in CAB1 | A myb-related transcription factor is involved in the phytochrome regulation of an Arabidopsis Lhcb gene | | 60.00% |
| Motif_646 | AACAOSGLUB1 | AACA motif found in GluB-1 gene in rice; Required for endosperm-specific expression; Highly conserved in the 5'-flanking region of glutelin genes | | 60.00% |
| Matrix_89 | SOC1 | Genome-wide identification of SOC1 and SVP targets during the floral transition in Arabidopsis | | 59.49% |
| Matrix_407 | AP1 | Not Available | | 57.45% |
| Motif_152 | MEJARELELOX | MeJa-responsive element (MeJaRE) in tomato lipoxygenase (LOX) gene; Related to tomato lipoxygenase gene expression during development and for MeJa (methyl jasmonate)-responsiveness | | 54.42% |
| Motif_153 | MARABOX1 | A-box found in SAR(scaffold attachment region; or matrix attachment region, MAR) | | 54.23% |
| Matrix_412 | GL1 | Not Available | | 54.03% |
| Matrix_184 | AGL15 | Not Available | | 54.01% |
| Matrix_383 | CCA1 | Not Available | | 53.68% |
| Motif_449 | AGL25; SVP | FLOWERING LOCUS C (FLC) regulates development pathways throughout the life cycle of Arabidopsis. Genome-wide identification of SOC1 and SVP targets during the floral transition in Arabidopsis | | 53.33% |
| Motif_66 | ESPASGL01 | ESP (endosperm specificity palindrome) element found in the promoter of oat (A.s.) globulin gene (AsGlo1) | | 53.33% |
| Motif_45 | AGL25; SOC1 | FLOWERING LOCUS C (FLC) regulates development pathways throughout the life cycle of Arabidopsis;Genome-wide identification of SOC1 and SVP targets during the floral transition in Arabidopsis | | 53.33% |
| Motif_387 | AG BS in SPL/NOZ | The homeotic protein AGAMOUS controls microsporogenesis by regulation of SPOROCYTELESS | | 53.33% |
| Motif_294 | HSRENTHSR203J | HSRE(HSR203 responsive element) in tobacco responsible for the marked induction of the HSR203J gene during the HR (hypersensitive response); HSR203J is specifically activated during the early steps of incompatible plant/pathogen interactions | | 53.33% |
| Motif_408 | EVENINGAT | Evening element found 46 times in the promoters of 31 cycling genes in Arabidopsis thaliana; Required for circadian control of gene expression; EE (evening element) motif; Also found in the promoter of the Solanum melongena gene encoding cysteine protease, and identified as cis-element for its circadian regulation;Orchestrated transcription of key pathways in Arabidopsis by the circadian clock | | 53.33% |
| Motif_246 | LBOXLERBCS | L box; Conserved sequence found in rbcS upstream sequences of both tomato and tobacco | | 53.33% |
| Motif_225 | PRHA BS in PAL1; PRHA BS in PAL1 | Developmental and auxin-induced expression of the Arabidopsis prha homeobox gene | | 53.33% |
| Matrix_132 | SOC1 | Not Available | | 53.12% |
| Matrix_160 | RVE1 | Not Available | | 52.96% |
| Matrix_213 | ATHB22 | Not Available | | 52.63% |
| Motif_482 | GARE2 | Putative gibberellin responsive element; Consensus sequence of GA inducible alpha-amylase genes from rice, barley and wheat | | 52.58% |
| Matrix_364 | FLC | Not Available | | 51.61% |
| Matrix_74 | LFY | Not Available | | 50.97% |
| Matrix_353 | HAT5 | Not Available | | 50.34% |
| Motif_43 | CCA1 binding site motif | CCA1 binding site; CCA1 protein (myb-related transcription factor) interact with two imperfect repeats of AAMAATCT in Lhcb1*3 gene of Arabidopsis thaliana; Related to regulation by phytochrome;A myb-related transcription factor is involved in the phytochrome regulation of an Arabidopsis Lhcb gene | | 50.00% |
| Motif_18 | 5659BOXLELAT5659 | 56/59 box; A sequence motif shared between the tomato LAT(Late Anther Tomato)56 and LAT59 promoters; Found in -103 to -94 in LAT56 and in -114 to -105 in LAT59; Involved in modulating the activity of the LAT gene promoters in pollen | | 50.00% |
Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench