Matrix_431 | ATHB21; HB-3 | Not Available | | 70.18% |
Matrix_444 | AT1G19485; AT4G17950 | Not Available | | 67.35% |
Matrix_427 | ZAT14 | Not Available | | 67.12% |
Matrix_12 | EIN3; EIL2 | Not Available | | 66.27% |
Matrix_220 | WRKY18 | Not Available | | 66.22% |
Matrix_3 | WRKY48 | Not Available | | 65.96% |
Matrix_131 | HDG12; EDT1; GL2; HDG8 | Not Available | | 65.92% |
Matrix_276 | AT1G01520; AT3G09600; AT4G01280; LCL1; AT5G52660 | Not Available | | 65.75% |
Matrix_197 | NAP | Not Available | | 65.62% |
Matrix_470 | WRKY18 | Not Available | | 65.34% |
Matrix_263 | WRKY33; WRKY19; WRKY32 | Not Available | | 65.25% |
Matrix_520 | ARR14 | Not Available | | 64.25% |
Matrix_392 | ARR2 | Not Available | | 64.24% |
Matrix_67 | GLK1 | Not Available | | 64.20% |
Matrix_102 | WRKY21 | Not Available | | 64.16% |
Matrix_207 | WRKY10; WRKY57; AT2G44745; ATWRKY13; WRKY49 | Not Available | | 64.09% |
Matrix_384 | ATWRKY17 | Not Available | | 64.00% |
Matrix_391 | AHL20 | Not Available | | 63.90% |
Matrix_370 | WRKY50; WRKY51 | Not Available | | 63.87% |
Matrix_75 | WRKY29 | Not Available | | 63.83% |
Matrix_202 | WRKY71; WRKY28; WRKY8 | Not Available | | 63.82% |
Matrix_52 | ZAT18 | Not Available | | 63.66% |
Matrix_505 | GATA8 | Not Available | | 63.53% |
Matrix_168 | AHL25 | Not Available | | 63.19% |
Matrix_333 | GATA3 | Not Available | | 62.87% |
Matrix_17 | WRKY22 | Not Available | | 62.73% |
Matrix_236 | CCA1 | Not Available | | 62.60% |
Matrix_457 | TGA2 | Not Available | | 62.46% |
Matrix_502 | AT3G13040 | Not Available | | 62.44% |
Matrix_32 | AHL25 | Not Available | | 62.34% |
Matrix_70 | GATA26 | Not Available | | 62.34% |
Matrix_439 | AP3 | Not Available | | 62.24% |
Matrix_143 | GATA14; GATA6; GATA5 | Not Available | | 62.12% |
Matrix_88 | AHL12 | Not Available | | 61.94% |
Matrix_103 | ATHB1 | The Athb-1 and -2 HD-Zip domains homodimerize forming complexes of different DNA binding specificities | | 61.90% |
Matrix_415 | WRKY27 | Not Available | | 61.81% |
Matrix_357 | WRKY61; WRKY6; WRKY9; WRKY36; WRKY47; WRKY42; WRKY31; WRKY72 | Not Available | | 61.77% |
Matrix_328 | AT1G76580 | Not Available | | 61.64% |
Matrix_483 | ICU4 | Not Available | | 61.51% |
Matrix_148 | WRKY60 | Not Available | | 61.32% |
Matrix_54 | AHL20 | Not Available | | 61.18% |
Matrix_504 | WRKY40 | Not Available | | 61.15% |
Matrix_441 | ATHB5 | Not Available | | 60.98% |
Matrix_500 | WRKY43 | Not Available | | 60.91% |
Matrix_366 | ARR14 | Not Available | | 60.86% |
Matrix_185 | AHL25 | Not Available | | 60.52% |
Matrix_380 | ATMYR1 | Not Available | | 60.47% |
Matrix_435 | ATHB51 | Not Available | | 60.46% |
Motif_277 | ATHB1 binding site motif | Recognition sequence of Arabidopsis Athb-1 protein; Athb-1 protein has a HD-Zip motif (homeodomain (HD) with a closely linked leucine zipper motif (Zip)); HD-Zip domain binds to DNA as a dimer; The Athb-1 and -2 HD-Zip domains homodimerize forming complexes of different DNA binding specificities | | 60.31% |
Matrix_199 | AT1G69170; SPL9; SPL15; SPL13A; SPL13B | Not Available | | 60.28% |
Matrix_423 | AT3G04030 | Not Available | | 60.12% |
Matrix_352 | LEC2 | Not Available | | 60.03% |
Matrix_314 | WRKY65; WRKY14; WRKY35; WRKY69; WRKY16; ATWRKY52 | Not Available | | 59.94% |
Matrix_76 | GATA10 | Not Available | | 59.90% |
Matrix_434 | ARR11 | Not Available | | 59.88% |
Matrix_450 | SPL7 | Not Available | | 59.87% |
Matrix_306 | TGA1 | TGA1 and G-box binding factors: two distinct classes of Arabidopsis leucine zipper proteins compete for the G-box-like element TGACGTGG | | 59.77% |
Matrix_507 | TCP3 | Not Available | | 59.64% |
Matrix_316 | WRKY15; WRKY39; WRKY7; WRKY74 | Not Available | | 59.57% |
Matrix_522 | GATA11; GATA13 | Not Available | | 59.51% |
Matrix_53 | MYC3 | Not Available | | 59.40% |
Matrix_325 | WRKY4; WRKY3; WRKY58; ATWRKY34; WRKY20; ATWRKY2 | Not Available | | 59.08% |
Matrix_249 | WRKY11 | Not Available | | 59.06% |
Matrix_368 | ATWRKY56; WRKY45; WRKY75; WRKY24 | Not Available | | 59.01% |
Matrix_188 | SPL4 | Not Available | | 59.00% |
Motif_231 | EIN3 | Ethylene signaling in Arabidopsis involves feedback regulation via the elaborate control of EBF2 expression by EIN3 | | 58.98% |
Matrix_85 | SPL5 | Not Available | | 58.87% |
Matrix_455 | MYB111 | Not Available | | 58.80% |
Matrix_38 | SPL14 | Not Available | | 58.51% |
Matrix_235 | WRKY67; WRKY64; WRKY63; WRKY66 | Not Available | | 58.43% |
Matrix_256 | IXR11; KNAT5; KNAT4; KNAT3 | Not Available | | 58.33% |
Matrix_284 | KAN2; KAN3; KAN; KAN4 | Not Available | | 58.24% |
Matrix_399 | TGA1 | Not Available | | 58.18% |
Matrix_212 | ATHB-12 | Not Available | | 58.17% |
Matrix_418 | KNAT6; KNAT2 | Not Available | | 58.17% |
Matrix_221 | SPL7 | Not Available | | 58.15% |
Matrix_37 | GATA27 | Not Available | | 58.14% |
Matrix_125 | AHL12 | Not Available | | 57.94% |
Matrix_463 | HAT3.1 | Not Available | | 57.85% |
Matrix_404 | OBP4 | Not Available | | 57.85% |
Matrix_240 | AT4G29000 | Not Available | | 57.75% |
Matrix_114 | EPR1; AT3G10113 | Not Available | | 57.71% |
Motif_284 | GT-2 | DNA binding factor GT-2 from Arabidopsis | | 57.64% |
Matrix_341 | HMGA | Not Available | | 57.50% |
Matrix_307 | RGL2; RGL3 | Not Available | | 57.41% |
Matrix_286 | GATA7 | Not Available | | 57.39% |
Matrix_289 | WRKY25 | Not Available | | 57.35% |
Matrix_216 | TCP16 | Not Available | | 57.24% |
Motif_352 | ATHB5 binding site motif | Consensus binding sequence for Arabidopsis class I HDzip (Homeodomein-leucine zipper) protein, ATHB5; ATHB5 protein forms dimers in solution; ATHB5 and ATHB6 exhibit identical DNA binding specificities; ATHB5 forms heterodimers with other class I HDzip proteins; DNA-binding and dimerization preferences of Arabidopsis homeodomain-leucine zipper transcription factors in vitro | | 57.15% |
Matrix_382 | AT3G04850 | Not Available | | 56.96% |
Matrix_521 | AHL20 | Not Available | | 56.95% |
Matrix_206 | CUC1; ANAC100 | Not Available | | 56.92% |
Matrix_62 | HAT5 | Not Available | | 56.88% |
Matrix_311 | TGA1 | Not Available | | 56.76% |
Matrix_469 | NAC041; NAC083 | Not Available | | 56.73% |
Matrix_51 | LFY | Not Available | | 56.72% |
Matrix_329 | WRKY12 | Not Available | | 56.71% |
Matrix_293 | WRKY38 | Not Available | | 56.67% |
Motif_356 | S2FSORPL21 | S2F binding site (S2 site) in spinach RPL21 gene encoding the plastid ribosomal protein L21; S2 site (CATACAWW) is conserved in promoter region of many nuclear genes encoding plastid proteins; Leaf-specific, light-independent regulatory element; S2 site is related to but different from the light-responsive GT-1 binding site | | 56.51% |
Matrix_351 | HAT9; ATHB-4; ATHB2; HAT22; HAT14 | Not Available | | 56.41% |
Matrix_408 | GATA12 | Not Available | | 56.35% |
Matrix_290 | AP2 | Not Available | | 56.28% |
Matrix_40 | TCP2 | Not Available | | 56.19% |
Matrix_203 | GATA9; GATA12 | Not Available | | 56.18% |
Matrix_225 | MYB52 | Not Available | | 55.97% |
Matrix_226 | GATA1 | Not Available | | 55.94% |
Matrix_195 | GATA2; GATA4 | Not Available | | 55.93% |
Motif_169 | ATHB2 binding site motif | Recognition sequence of Arabidopsis Athb-2 protein; Athb-2 protein has a HD-Zip motif (homeodomain (HD) with a closely linked leucine zipper motif (Zip)); The Athb-1 and -2 HD-Zip domains homodimerize forming complexes of different DNA binding specificities | | 55.82% |
Matrix_337 | MYB46 | Not Available | | 55.80% |
Motif_624 | ATHB6 binding site motif | Consensus binding sequence for Arabidopsis homeodomain-leucine zipper protein, ATHB6; ATHB6 is a target of the protein phosphatase ABI1 and regulates hormone responses; Homeodomain protein ATHB6 is a target of the protein phosphatase ABI1 and regulates hormone responses in Arabidopsis | | 55.77% |
Matrix_36 | RAV1_1 | RAV1, a novel DNA-binding protein, binds to bipartite recognition sequence through two distinct DNA-binding domains uniquely found in higher plants | | 55.74% |
Matrix_412 | GL1 | Not Available | | 55.70% |
Matrix_491 | AT1G68670; AT3G25790 | Not Available | | 55.68% |
Motif_556 | INTRONUPPER | 5' exon-intron splice junctions of plant introns; Plant intron upper sequence; Consensus sequence for plant introns | | 55.67% |
Matrix_308 | INO | Not Available | | 55.64% |
Matrix_182 | ATHB6 | Not Available | | 55.62% |
Matrix_523 | FUSCA3 | Not Available | | 55.58% |
Matrix_66 | AtLEC2 | Genes directly regulated by LEAFY COTYLEDON2 provide insight into the control of embryo maturation and somatic embryogenesis | | 55.54% |
Matrix_205 | AGL15 | Not Available | | 55.31% |
Matrix_268 | EMB2749; VND5; SMB; VND1; ANAC076; NAC101; ANAC105 | Not Available | | 55.31% |
Matrix_313 | ATMYB65; MYB33 | Not Available | | 55.26% |
Matrix_93 | YAB5 | Not Available | | 55.25% |
Matrix_259 | AT1G50680; AT1G51120 | Not Available | | 55.17% |
Motif_675 | FUS3; ABI3 | Gene regulation during late embryogenesis: the RY motif of maturation-specific gene promoters is a direct target of the FUS3 gene product | | 55.03% |
Matrix_69 | AT2G03500 | Not Available | | 55.01% |
Matrix_230 | ARR11 | Not Available | | 54.93% |
Matrix_97 | APRR2 | Not Available | | 54.86% |
Matrix_161 | MYBC1; AT3G10760; LUX; AT5G05090; AT5G59570 | Not Available | | 54.85% |
Motif_123 | GT-1 | Molecular dissection of GT-1 from Arabidopsis | | 54.84% |
Matrix_350 | ARR14 | Not Available | | 54.79% |
Matrix_315 | MYB111 | Not Available | | 54.78% |
Matrix_318 | ATHB16 | Not Available | | 54.74% |
Matrix_8 | KAN1 | Not Available | | 54.74% |
Matrix_421 | GLK1 | Not Available | | 54.70% |
Matrix_425 | TIFY2A | Not Available | | 54.67% |
Matrix_128 | TGA2 | Not Available | | 54.62% |
Motif_442 | GT2OSPHYA | GT-2 (a rice nuclear protein) binding site in a rice phyA promoter; phyA gene are transcriptionaly repressed in response to light; One of GT elements;The HMG-1/Y protein PF1 stimulates binding of the GT-2 to PHYA gene promoter | | 54.59% |
Matrix_299 | PFG3 | Not Available | | 54.57% |
Matrix_489 | RAV1 | Not Available | | 54.52% |
Matrix_361 | AT1G25550 | Not Available | | 54.47% |
Matrix_508 | APL; AT3G12730; AT3G24120; UNE16 | Not Available | | 54.47% |
Matrix_31 | SPL1 | Not Available | | 54.46% |
Matrix_41 | anac058 | Not Available | | 54.46% |
Motif_285 | HDZIP2ATATHB2 | Binding site of the Arabidopsis homeobox gene (ATHB-2) found in its own promoter; Located between -72 and -80; Similar to the HD-ZIP-2 binding consensus sequence; ATHB-2 is regulated by light signals which function as a negative autoregulator of its own gene | | 54.41% |
Matrix_210 | ARR1 | Not Available | | 54.37% |
Matrix_101 | ERF5 | Not Available | | 54.36% |
Matrix_495 | HD-GL2-1; ANL2 | Not Available | | 54.29% |
Matrix_4 | ARR14 | Not Available | | 54.23% |
Matrix_312 | ARF11; MP; ARF6; IAA21; ARF8; ARF4 | Not Available | | 54.15% |
Matrix_447 | RVE1 | Not Available | | 54.05% |
Matrix_157 | LHY; RVE2 | Not Available | | 53.99% |
Matrix_271 | AT3G16350 | Not Available | | 53.96% |
Matrix_80 | BIM1 | Not Available | | 53.95% |
Matrix_376 | WRKY45 | Not Available | | 53.95% |
Matrix_397 | GT2L | Not Available | | 53.90% |
Matrix_461 | ATHB12 | Not Available | | 53.88% |
Motif_367 | FUS3 | Gene regulation during late embryogenesis: the RY motif of maturation-specific gene promoters is a direct target of the FUS3 gene product | | 53.81% |
Matrix_139 | OBF5 | Not Available | | 53.80% |
Matrix_137 | SPL1; SPL12 | Not Available | | 53.79% |
Motif_414 | ABI3 | Gene regulation during late embryogenesis: the RY motif of maturation-specific gene promoters is a direct target of the FUS3 gene product | | 53.71% |
Matrix_152 | EIL1; AT5G65100 | Not Available | | 53.60% |
Matrix_162 | AtPHR1 | Not Available | | 53.56% |
Matrix_144 | AT5G08330; AT5G23280 | Not Available | | 53.52% |
Matrix_245 | WRKY62; WRKY38 | Not Available | | 53.45% |
Matrix_16 | AT3G04450; PHL1 | Not Available | | 53.42% |
Motif_674 | SPL4; SPL1; SPL5 | Molecular characterisation of the Arabidopsis SBP-box genes. Gene,A novel zinc-binding motif revealed by solution structures of DNA-binding domains of Arabidopsis SBP-family transcription factors | | 53.30% |
Matrix_280 | TCP24; TCP1; BRC2; ATTCP18 | Not Available | | 53.28% |
Matrix_324 | AT2G01060 | Not Available | | 53.27% |
Matrix_81 | YAB1 | Not Available | | 53.27% |
Matrix_196 | TCP20; AT5G41030 | Not Available | | 53.22% |
Matrix_71 | ATHB7 | Not Available | | 53.19% |
Motif_161 | SPL7; SPL4 | A novel zinc-binding motif revealed by solution structures of DNA-binding domains of Arabidopsis SBP-family transcription factors | | 53.17% |
Matrix_424 | MYB59 | Not Available | | 53.07% |
Matrix_238 | WRKY59; WRKY23; WRKY68 | Not Available | | 52.99% |
Matrix_261 | ATERF-1 | Not Available | | 52.97% |
Matrix_401 | MYB55 | Not Available | | 52.95% |
Matrix_109 | GBF3 | Not Available | | 52.93% |
Matrix_285 | DDF1 | Not Available | | 52.92% |
Matrix_175 | Dof5.7 | Not Available | | 52.81% |
Matrix_99 | DOF4.7 | Not Available | | 52.81% |
Matrix_14 | ZCW32; AT5G62610 | Not Available | | 52.80% |
Matrix_169 | E2F1 | Not Available | | 52.79% |
Matrix_515 | ddf2; ATCBF3; CBF1; CBF4 | Not Available | | 52.79% |
Matrix_481 | BES1 | A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana | | 52.78% |
Matrix_227 | AT1G64620 | Not Available | | 52.74% |
Matrix_33 | SPL11; SPL10; SPL2 | Not Available | | 52.72% |
Matrix_141 | AT3G25990 | Not Available | | 52.72% |
Matrix_432 | AT1G77920 | Not Available | | 52.72% |
Matrix_419 | TGA9; PAN; TGA6; bZIP65 | Not Available | | 52.63% |
Matrix_331 | GBF1 | Not Available | | 52.60% |
Motif_256 | RHE_element | Functional Conservation of a Root Hair Cell-Specific cis-Element in Angiosperms with Different Root Hair Distribution Patterns | | 52.59% |
Matrix_326 | AT5G07310; Rap2.6L; AT5G61890 | Not Available | | 52.49% |
Matrix_91 | CRF3 | Not Available | | 52.47% |
Matrix_512 | HAT3 | Not Available | | 52.41% |
Matrix_302 | HAT1; HAT2 | Not Available | | 52.35% |
Matrix_287 | ERF2 | Not Available | | 52.29% |
Matrix_201 | AT1G74840 | Not Available | | 52.28% |
Matrix_393 | REM1 | Not Available | | 52.20% |
Motif_512 | GLMHVCHORD | GLM (GCN4-like motif) found in the promoter of barley B1- and c-hordein gene; Involved in the nitrogen response of c-hordein promoter; SPA, a seed-specific basic leucine zipper protein from wheat, can activate transcription from the GCN4-like motif (GLM) of -326 LMWG-1D1 promoter | | 52.00% |
Matrix_416 | ASL5 | Not Available | | 52.00% |
Matrix_231 | HDG2; HDG3; ATML1; HB-7 | Not Available | | 51.98% |
Matrix_367 | REM1 | Not Available | | 51.84% |
Matrix_327 | ARR11 | Not Available | | 51.83% |
Matrix_279 | HRS1 | Not Available | | 51.82% |
Motif_83 | CIACADIANLELHC | Region necessary for circadian expression of tomato Lhc gene | | 51.78% |
Motif_222 | AGMOTIFNTMYB2 | AG-motif found at -114 of the promoter of NtMyb2 gene; NtMyb2 is a regulator of the tobacco retrotransposon Tto1 and the defence-related gene phenylalanine ammonia lyase (PAL), which are induced by various stress such as wounding or elicitor treatment; AGP1 (GATA-type zinc finger protein) binding site | | 51.78% |
Motif_282 | D4GMAUX28 | D4; DNase I protected sequence found in the soybean auxin responsive gene, Aux28, promoter; D1 and D4 share a very similar core sequence TAGTXXCTGT and TAGTXCTGT, respectively; D1/D4-like sequence were identified in several other auxin-responsive genes | | 51.75% |
Motif_456 | FUS3; ABI3 | Gene regulation during late embryogenesis: the RY motif of maturation-specific gene promoters is a direct target of the FUS3 gene product | | 51.68% |
Matrix_46 | AT4G21895 | Not Available | | 51.63% |
Matrix_142 | ZFP8 | Not Available | | 51.61% |
Matrix_44 | CUC3; anac046; NAC3; ANAC087; ATNAC6; CUC2 | Not Available | | 51.60% |
Matrix_209 | RAP2.6 | Not Available | | 51.49% |
Matrix_253 | ETT | Not Available | | 51.48% |
Matrix_277 | RAP2.6 | Not Available | | 51.48% |
Matrix_377 | AT1G75490; DREB2C; AT2G40350; AT5G18450 | Not Available | | 51.47% |
Matrix_56 | BZIP17; BZIP28; BZIP49 | Not Available | | 51.37% |
Matrix_494 | OBP4 | Not Available | | 51.36% |
Matrix_59 | AT4G00238; AT4G00250 | Not Available | | 51.30% |
Matrix_167 | ZAT6 | Not Available | | 51.28% |
Motif_263 | RYREPEATVFLEB4; ABI3 | RY repeat motif; quantitative seed expression; Gene: Vicia faba LeB4; Soybean glycinin (Gy2); other dicot and monocot seed protein genes; Sph box found in rice Osem gene promoter; Binding site of Arabidopsis B3-domain-containing transcription factor FUS3; TRAB1, bZIP transcription factor, interacts with VP1 and mediates abscisic acid-induced transcritption; FUS3 protein physically interact with two RY elements present in the AtGA3ox promoter;RY repeats are conserved in the 5 prime-flanking region of legume seed protein genes. Gene regulation during late embryogenesis: the RY motif of maturation-specific gene promoters is a direct target of the FUS3 gene product | | 51.27% |
Matrix_21 | HSFC1 | Not Available | | 51.17% |
Matrix_493 | AT1G22985; AT1G71130 | Not Available | | 51.13% |
Matrix_151 | ASIL1 | Not Available | | 50.97% |
Matrix_122 | ABF1; AREB2 | Not Available | | 50.94% |
Matrix_181 | Dof5.7 | Not Available | | 50.91% |
Matrix_9 | AT5G04760 | Not Available | | 50.89% |
Matrix_374 | AT5G07580; AT5G61590 | Not Available | | 50.86% |
Motif_260 | MYB98 | MYB98 positively regulates a battery of synergid-expressed genes encoding filiform apparatus localized proteins | | 50.82% |
Matrix_63 | ARR10 | Not Available | | 50.80% |
Motif_177 | -300MOTIFZMZEIN | Motif in -300 elements of alpha-zein genes of maize; homologous to the sequence to which transacting factors of AP-1, fos, jun or yeast hisS bind | | 50.79% |
Matrix_355 | ERF10; ERF11 | Not Available | | 50.71% |
Matrix_390 | GT-1 | Not Available | | 50.69% |
Matrix_166 | TGA4 | Not Available | | 50.64% |
Matrix_297 | TCP15 | Not Available | | 50.57% |
Motif_131 | P1BS | PHR1-binding sequence found in the upstream regions of phosphate starvation responsive genes from several plant species; phr1 (phosphate starvation response 1) gene codes for PHR1 protein related to PSR1 gene in C. reinhardtii | | 50.53% |
Matrix_165 | KNAT1 | Not Available | | 50.37% |
Motif_491 | GT-1 | Molecular dissection of GT-1 from Arabidopsis | | 50.32% |
Matrix_154 | AT1G22190; AT1G36060; AT1G64380; RAP2.4; AT2G20880; AT2G22200; AT4G13620; AT4G28140; AT4G39780; AT5G65130 | Not Available | | 50.32% |
Motif_71 | WRKY63 | ABO3, a WRKY transcription factor, mediates plant responses to abscisic acid and drought tolerance in Arabidopsis | | 50.18% |
Motif_235 | C8GCARGAT | Binding site of plant MADS-domain protein AGL15; CArG motif with a longer A/T-rich core;A variant of CArG motif, with a longer A/T-rich core; Binding site for AGL15 (AGAMOUS-like 15) | | 50.11% |
Matrix_348 | AT5G51910 | Not Available | | 50.03% |