Matrix_13 | HAT5 | Not Available | | 84.01% |
Matrix_124 | AtHB23; ATHB13; ATHB20; ATHB5 | Not Available | | 68.67% |
Matrix_495 | HD-GL2-1; ANL2 | Not Available | | 64.11% |
Matrix_213 | ATHB22 | Not Available | | 62.78% |
Matrix_440 | LFY | Not Available | | 61.32% |
Matrix_89 | SOC1 | Genome-wide identification of SOC1 and SVP targets during the floral transition in Arabidopsis | | 61.20% |
Matrix_435 | ATHB51 | Not Available | | 61.16% |
Matrix_499 | ARR18 | Not Available | | 60.99% |
Motif_87 | AGL22; AGL20; AGL24 | Regulation of floral patterning by flowering time genes | | 60.68% |
Motif_44 | AGL25 | FLOWERING LOCUS C (FLC) regulates development pathways throughout the life cycle of Arabidopsis | | 58.85% |
Matrix_407 | AP1 | Not Available | | 58.81% |
Motif_30 | HSELIKENTACIDICPR1 | HSE-like motif in -56 region of acidic PR1 gene of tobacco; not found in basic PR1 gene | | 57.98% |
Matrix_441 | ATHB5 | Not Available | | 57.83% |
Matrix_302 | HAT1; HAT2 | Not Available | | 57.71% |
Matrix_413 | RAV1 | Not Available | | 57.40% |
Matrix_298 | RAV1 | Not Available | | 57.40% |
Matrix_429 | KAN4 | Not Available | | 57.12% |
Matrix_483 | ICU4 | Not Available | | 57.09% |
Matrix_29 | AP1 | Not Available | | 57.08% |
Matrix_153 | AP2 | Not Available | | 57.08% |
Motif_142 | HDZIPIIIAT | Ath b-9 HD-Zip (HD-Zip-9), a member of a small family of HD-Zip proteins (HD-ZIP III), in Arabidopsis recognize this sequence | | 56.90% |
Motif_449 | AGL25; SVP | FLOWERING LOCUS C (FLC) regulates development pathways throughout the life cycle of Arabidopsis. Genome-wide identification of SOC1 and SVP targets during the floral transition in Arabidopsis | | 56.71% |
Motif_45 | AGL25; SOC1 | FLOWERING LOCUS C (FLC) regulates development pathways throughout the life cycle of Arabidopsis;Genome-wide identification of SOC1 and SVP targets during the floral transition in Arabidopsis | | 56.71% |
Motif_277 | ATHB1 binding site motif | Recognition sequence of Arabidopsis Athb-1 protein; Athb-1 protein has a HD-Zip motif (homeodomain (HD) with a closely linked leucine zipper motif (Zip)); HD-Zip domain binds to DNA as a dimer; The Athb-1 and -2 HD-Zip domains homodimerize forming complexes of different DNA binding specificities | | 56.51% |
Matrix_461 | ATHB12 | Not Available | | 56.36% |
Motif_267 | WBOXGACAD1A | W-box found in the promoter region of the CAD1-A (cotton (+) delta-cadinene synthase-A) gene (located in the region -340 to -327) of cotton;Binding site of GaWRKY1; GaWRKY1 regulates sesquiterpene biosynthesis in cotton | | 56.34% |
Motif_352 | ATHB5 binding site motif | Consensus binding sequence for Arabidopsis class I HDzip (Homeodomein-leucine zipper) protein, ATHB5; ATHB5 protein forms dimers in solution; ATHB5 and ATHB6 exhibit identical DNA binding specificities; ATHB5 forms heterodimers with other class I HDzip proteins; DNA-binding and dimerization preferences of Arabidopsis homeodomain-leucine zipper transcription factors in vitro | | 56.31% |
Matrix_352 | LEC2 | Not Available | | 56.06% |
Matrix_172 | BES1 | A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana | | 56.00% |
Matrix_81 | YAB1 | Not Available | | 55.96% |
Matrix_71 | ATHB7 | Not Available | | 55.83% |
Matrix_204 | WOX13 | Not Available | | 55.46% |
Motif_285 | HDZIP2ATATHB2 | Binding site of the Arabidopsis homeobox gene (ATHB-2) found in its own promoter; Located between -72 and -80; Similar to the HD-ZIP-2 binding consensus sequence; ATHB-2 is regulated by light signals which function as a negative autoregulator of its own gene | | 55.46% |
Matrix_498 | AT2G28710; AT3G46070; AT3G46080; ZAT7 | Not Available | | 55.43% |
Matrix_83 | PRR5 | Not Available | | 55.35% |
Matrix_246 | ARR10 | Molecular structure of the GARP family of plant Myb-related DNA binding motifs of the Arabidopsis response regulators | | 55.18% |
Matrix_132 | SOC1 | Not Available | | 55.15% |
Matrix_62 | HAT5 | Not Available | | 55.02% |
Matrix_103 | ATHB1 | The Athb-1 and -2 HD-Zip domains homodimerize forming complexes of different DNA binding specificities | | 54.75% |
Matrix_471 | KAN4 | Not Available | | 54.67% |
Matrix_431 | ATHB21; HB-3 | Not Available | | 54.64% |
Motif_169 | ATHB2 binding site motif | Recognition sequence of Arabidopsis Athb-2 protein; Athb-2 protein has a HD-Zip motif (homeodomain (HD) with a closely linked leucine zipper motif (Zip)); The Athb-1 and -2 HD-Zip domains homodimerize forming complexes of different DNA binding specificities | | 54.62% |
Matrix_497 | AP3 | Not Available | | 54.61% |
Matrix_161 | MYBC1; AT3G10760; LUX; AT5G05090; AT5G59570 | Not Available | | 54.57% |
Matrix_369 | AT2G18300 | Not Available | | 54.50% |
Matrix_72 | CDF2 | Not Available | | 54.33% |
Matrix_55 | PIF3 | Not Available | | 54.25% |
Matrix_108 | PIF4 | Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses | | 54.22% |
Matrix_18 | AP3 | Not Available | | 54.10% |
Matrix_136 | SEP3 | Not Available | | 53.87% |
Matrix_227 | AT1G64620 | Not Available | | 53.79% |
Motif_173 | HSE | HSE (heat shock response element); consensus sequence found in the promoter regions of heat shock protein genes; HSF binding site; HsfA3, a new member of the Hsf (heat stress transcription factor) family; was isolated by yeast two-hybrid screening, using HsfA1 as a bait; HsfA3 is a single copy gene with all conserved sequence elements characteristic of a heat stress transcription factor | | 53.66% |
Matrix_51 | LFY | Not Available | | 53.64% |
Matrix_120 | BEE2 | Not Available | | 53.49% |
Matrix_464 | AGL15; AGL71 | Not Available | | 53.46% |
Matrix_77 | PRR5 | Not Available | | 53.37% |
Motif_283 | TRANSTART | plant consensus sequence for translation start site | | 53.35% |
Matrix_523 | FUSCA3 | Not Available | | 53.17% |
Matrix_447 | RVE1 | Not Available | | 53.16% |
Matrix_351 | HAT9; ATHB-4; ATHB2; HAT22; HAT14 | Not Available | | 53.15% |
Matrix_264 | ATAREB1 | Not Available | | 53.14% |
Matrix_93 | YAB5 | Not Available | | 53.04% |
Motif_298 | GMHDLGMVSPB | Binding site of the soybean homeodomein leucine zipper proteins (GmHdl56, GmHdl57); Found in the phosphate response domain of the soybean VspB promoter; Located between -536 and -527; VspB encodes vacuolar glycoprotein acid phosphatase that serve as vegetative storage protein | | 52.99% |
Matrix_6 | AT1G70000 | Not Available | | 52.95% |
Matrix_364 | FLC | Not Available | | 52.92% |
Matrix_489 | RAV1 | Not Available | | 52.88% |
Motif_9 | RBENTGA3 | rbe (RSG binding element) found in the tobacco GA3 gene promoter; Binding site of RSG (Repression of shoot growth); RSG is a bZIP transcriptional activator; RSG regulates the morphology of plants by controlling the endogenous amounts of GAs | | 52.87% |
Matrix_205 | AGL15 | Not Available | | 52.77% |
Motif_624 | ATHB6 binding site motif | Consensus binding sequence for Arabidopsis homeodomain-leucine zipper protein, ATHB6; ATHB6 is a target of the protein phosphatase ABI1 and regulates hormone responses; Homeodomain protein ATHB6 is a target of the protein phosphatase ABI1 and regulates hormone responses in Arabidopsis | | 52.75% |
Matrix_106 | AT5G47390 | Not Available | | 52.75% |
Matrix_271 | AT3G16350 | Not Available | | 52.70% |
Matrix_182 | ATHB6 | Not Available | | 52.68% |
Matrix_408 | GATA12 | Not Available | | 52.66% |
Matrix_226 | GATA1 | Not Available | | 52.62% |
Matrix_383 | CCA1 | Not Available | | 52.55% |
Matrix_284 | KAN2; KAN3; KAN; KAN4 | Not Available | | 52.45% |
Matrix_333 | GATA3 | Not Available | | 52.25% |
Matrix_438 | AtbZIP63 | Not Available | | 52.16% |
Matrix_477 | RAV1 | Not Available | | 52.15% |
Matrix_34 | RAV1_2 | RAV1, a novel DNA-binding protein, binds to bipartite recognition sequence through two distinct DNA-binding domains uniquely found in higher plants | | 52.15% |
Matrix_467 | RAV1 | Not Available | | 52.15% |
Matrix_33 | SPL11; SPL10; SPL2 | Not Available | | 52.08% |
Matrix_140 | ATHB5 | DNA-binding and dimerization preferences of Arabidopsis homeodomain-leucine zipper transcription factors in vitro | | 51.98% |
Matrix_323 | BIM3 | Not Available | | 51.94% |
Matrix_465 | MYC4 | Not Available | | 51.92% |
Matrix_195 | GATA2; GATA4 | Not Available | | 51.89% |
Matrix_160 | RVE1 | Not Available | | 51.89% |
Matrix_412 | GL1 | Not Available | | 51.87% |
Matrix_439 | AP3 | Not Available | | 51.72% |
Matrix_74 | LFY | Not Available | | 51.71% |
Motif_39 | CYTOSITECSHPRA | 13 bp sequence of unknown function found in cucumber hydroxypyruvate reductase (hprA) gene promoter; Protein binding site; Required for cytokinin responsiveness; See AS1LIKECSHPRA found in the same region; Also involved in light responsiveness | | 51.69% |
Matrix_494 | OBP4 | Not Available | | 51.61% |
Matrix_309 | FLC | Not Available | | 51.60% |
Motif_294 | HSRENTHSR203J | HSRE(HSR203 responsive element) in tobacco responsible for the marked induction of the HSR203J gene during the HR (hypersensitive response); HSR203J is specifically activated during the early steps of incompatible plant/pathogen interactions | | 51.57% |
Matrix_36 | RAV1_1 | RAV1, a novel DNA-binding protein, binds to bipartite recognition sequence through two distinct DNA-binding domains uniquely found in higher plants | | 51.44% |
Matrix_306 | TGA1 | TGA1 and G-box binding factors: two distinct classes of Arabidopsis leucine zipper proteins compete for the G-box-like element TGACGTGG | | 51.41% |
Matrix_330 | MYC2; TT8 | Not Available | | 51.41% |
Matrix_286 | GATA7 | Not Available | | 51.30% |
Matrix_158 | AT1G03040; LRL1; UNE12; LRL2; LRL3 | Not Available | | 51.29% |
Matrix_9 | AT5G04760 | Not Available | | 51.13% |
Matrix_184 | AGL15 | Not Available | | 51.13% |
Matrix_210 | ARR1 | Not Available | | 51.12% |
Matrix_149 | PI | Not Available | | 51.10% |
Matrix_4 | ARR14 | Not Available | | 51.04% |
Matrix_181 | Dof5.7 | Not Available | | 51.02% |
Matrix_508 | APL; AT3G12730; AT3G24120; UNE16 | Not Available | | 50.99% |
Matrix_178 | HSFB2A | Not Available | | 50.96% |
Matrix_135 | ABI3 | Not Available | | 50.84% |
Matrix_203 | GATA9; GATA12 | Not Available | | 50.77% |
Matrix_449 | BIM2 | Not Available | | 50.75% |
Matrix_404 | OBP4 | Not Available | | 50.74% |
Matrix_8 | KAN1 | Not Available | | 50.50% |
Motif_23 | 14BPATERD1 | 14 bp region (from -599 to -566) necessary for expression of erd1 (early responsive to dehydration) in dehydrated Arabidopsis | | 50.41% |
Matrix_225 | MYB52 | Not Available | | 50.38% |
Matrix_48 | PI | Not Available | | 50.38% |
Matrix_502 | AT3G13040 | Not Available | | 50.34% |
Matrix_104 | PI | Not Available | | 50.32% |
Motif_117 | RYREPEAT4 | RY repeat motif; Sph element; seed expression; ABA; Gene: maize C1, wheat Em, rice rab16A, maize Rab17; Transacting factor: VP1 (maize C1); See RYREPEAT2; The RY sequence motif does not play a major role in VP1 or ABA regulation of Em gene in protoplast; VP1 gene is specifically required for expression of the maturation program in seed development | | 50.30% |
Matrix_347 | WOX14; WOX10 | Not Available | | 50.27% |
Matrix_231 | HDG2; HDG3; ATML1; HB-7 | Not Available | | 50.24% |
Matrix_187 | CDC5 | Not Available | | 50.17% |
Matrix_349 | CDC5 | Not Available | | 50.17% |
Matrix_236 | CCA1 | Not Available | | 50.17% |
Matrix_491 | AT1G68670; AT3G25790 | Not Available | | 50.10% |
Matrix_391 | AHL20 | Not Available | | 50.03% |
Matrix_97 | APRR2 | Not Available | | 50.01% |
Matrix_269 | FHY3/FAR1 | Not Available | | 50.00% |