PLAZA 3.0 Dicots : Binding Sites

Binding sites with simlar sequences

Binding site: Matrix_144
Name: AT5G08330; AT5G23280
Description: Not Available

Positional Weight Matrix

Minimum similarity percentage

Binding site	Name	Description	Similarity
Matrix_40	TCP2	Not Available	89.65%
Matrix_42	AT2G45680	Not Available	83.84%
Matrix_348	AT5G51910	Not Available	82.04%
Matrix_130	TCP16	Not Available	78.64%
Matrix_266	TCP16	Determinants of the DNA binding specificity of class I and class II TCP transcription factors	78.64%
Matrix_507	TCP3	Not Available	73.23%
Matrix_280	TCP24; TCP1; BRC2; ATTCP18	Not Available	71.19%
Matrix_481	BES1	A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana	67.67%
Matrix_297	TCP15	Not Available	67.31%
Matrix_169	E2F1	Not Available	66.45%
Motif_264	GCBP2ZMGAPC4	Binding site of tobacco nuclear factor (GCBP-2) found in the maize GapC4 (Glyceraldehyde-3-phosphate dehydrogenase 4) gene promoter; Located between -293 and -285	66.27%
Matrix_101	ERF5	Not Available	65.71%
Matrix_52	ZAT18	Not Available	64.77%
Matrix_216	TCP16	Not Available	64.57%
Motif_650	SITEIIAOSPCNA	Site IIa of rice PCNA (proliferating cell nuclear antigen) gene; Found at -197 to -188; Binding site for two nuclear proteins, PCF1 and PCF2; Suggested to be involved in meristematic tissue-specific expression; Resemble the conserved motif (T/GGTCCCAT) found in promoter regions of auxin-regulated genes; See AUXREPSIAA4	64.20%
Matrix_287	ERF2	Not Available	64.00%
Matrix_69	AT2G03500	Not Available	63.87%
Matrix_230	ARR11	Not Available	63.86%
Motif_619	SITEIIBOSPCNA	Site IIb of rice PCNA (proliferating cell nuclear antigen) gene; Found at -178 to -169; Binding site for two nuclear proteins, PCF1 and PCF2; Suggested to be involved in meristematic tissue-specific expression; Resemble the conserved motif (T/GGTCCCAT) found in promoter regions of auxin-regulated genes	63.60%
Matrix_232	TCP23	Not Available	63.51%
Matrix_50	ATERF14; AT5G43410	Not Available	63.12%
Matrix_370	WRKY50; WRKY51	Not Available	62.76%
Matrix_281	TCP13	Not Available	62.64%
Matrix_234	RAP2.3	Not Available	62.58%
Matrix_263	WRKY33; WRKY19; WRKY32	Not Available	62.51%
Matrix_3	WRKY48	Not Available	62.49%
Matrix_162	AtPHR1	Not Available	62.35%
Matrix_328	AT1G76580	Not Available	62.35%
Matrix_463	HAT3.1	Not Available	62.33%
Motif_219	E2Fa	The E2F family of transcription factors from Arabidopsis thaliana. Novel and conserved components of the retinoblastoma/E2F pathway in plants	62.24%
Matrix_17	WRKY22	Not Available	62.18%
Matrix_59	AT4G00238; AT4G00250	Not Available	62.04%
Matrix_190	ATERF1	Not Available	62.01%
Matrix_75	WRKY29	Not Available	61.87%
Matrix_12	EIN3; EIL2	Not Available	61.86%
Matrix_361	AT1G25550	Not Available	61.53%
Matrix_195	GATA2; GATA4	Not Available	61.22%
Matrix_224	ERF1	Not Available	61.07%
Matrix_16	AT3G04450; PHL1	Not Available	61.07%
Matrix_493	AT1G22985; AT1G71130	Not Available	61.05%
Matrix_326	AT5G07310; Rap2.6L; AT5G61890	Not Available	60.90%
Matrix_350	ARR14	Not Available	60.83%
Matrix_288	RAP2.3	Not Available	60.80%
Matrix_324	AT2G01060	Not Available	60.80%
Matrix_290	AP2	Not Available	60.70%
Matrix_256	IXR11; KNAT5; KNAT4; KNAT3	Not Available	60.69%
Matrix_418	KNAT6; KNAT2	Not Available	60.68%
Matrix_91	CRF3	Not Available	60.65%
Matrix_268	EMB2749; VND5; SMB; VND1; ANAC076; NAC101; ANAC105	Not Available	60.50%
Matrix_508	APL; AT3G12730; AT3G24120; UNE16	Not Available	60.50%
Matrix_408	GATA12	Not Available	60.42%
Matrix_155	RAP2.6; ERF110; ABR1	Not Available	60.37%
Matrix_491	AT1G68670; AT3G25790	Not Available	60.25%
Matrix_405	DREB2C	Not Available	60.18%
Matrix_94	TCP5	Not Available	60.06%
Matrix_226	GATA1	Not Available	59.82%
Matrix_294	MEE35	Not Available	59.78%
Matrix_373	E2FE	Not Available	59.49%
Matrix_355	ERF10; ERF11	Not Available	59.48%
Matrix_70	GATA26	Not Available	59.43%
Matrix_482	AT2G25650; AT4G00270	Not Available	59.42%
Matrix_489	RAV1	Not Available	59.37%
Matrix_38	SPL14	Not Available	59.34%
Matrix_154	AT1G22190; AT1G36060; AT1G64380; RAP2.4; AT2G20880; AT2G22200; AT4G13620; AT4G28140; AT4G39780; AT5G65130	Not Available	59.28%
Matrix_502	AT3G13040	Not Available	59.20%
Matrix_343	AT2G33710	Not Available	59.15%
Matrix_110	ATABI4; AT3G57600	Not Available	59.14%
Matrix_415	WRKY27	Not Available	58.95%
Matrix_472	ZN_C2_H2	Not Available	58.90%
Matrix_261	ATERF-1	Not Available	58.85%
Matrix_286	GATA7	Not Available	58.79%
Matrix_243	RAP2.12; RAP2.2	Not Available	58.73%
Matrix_206	CUC1; ANAC100	Not Available	58.67%
Matrix_363	RAP2.3	Not Available	58.59%
Matrix_308	INO	Not Available	58.55%
Matrix_82	TCP17	Not Available	58.55%
Matrix_333	GATA3	Not Available	58.52%
Matrix_374	AT5G07580; AT5G61590	Not Available	58.47%
Matrix_334	AT3G23230	Not Available	58.41%
Matrix_271	AT3G16350	Not Available	58.40%
Matrix_311	TGA1	Not Available	58.34%
Matrix_380	ATMYR1	Not Available	58.29%
Matrix_473	RRTF1	Not Available	58.18%
Matrix_128	TGA2	Not Available	58.04%
Matrix_220	WRKY18	Not Available	57.93%
Matrix_97	APRR2	Not Available	57.93%
Matrix_384	ATWRKY17	Not Available	57.88%
Matrix_102	WRKY21	Not Available	57.87%
Matrix_433	ATERF1	Not Available	57.51%
Matrix_378	ATERF1	Not Available	57.38%
Matrix_406	ATERF-7	Not Available	57.33%
Matrix_85	SPL5	Not Available	57.17%
Matrix_152	EIL1; AT5G65100	Not Available	57.14%
Matrix_470	WRKY18	Not Available	57.08%
Matrix_141	AT3G25990	Not Available	56.91%
Matrix_409	DEAR3	Not Available	56.90%
Matrix_199	AT1G69170; SPL9; SPL15; SPL13A; SPL13B	Not Available	56.83%
Matrix_6	AT1G70000	Not Available	56.80%
Matrix_283	GATA15; GATA17; AT4G16141; GATA22; GATA23; GATA16; GNC	Not Available	56.61%
Matrix_207	WRKY10; WRKY57; AT2G44745; ATWRKY13; WRKY49	Not Available	56.37%
Motif_385	GGTCCCATGMSAUR	Sequence found in NDE element in Soybean SAUR (Small Auxin-Up RNA) 15A gene promoter; Involved in auxin responsiveness	56.28%
Matrix_210	ARR1	Not Available	56.27%
Matrix_143	GATA14; GATA6; GATA5	Not Available	56.22%
Matrix_196	TCP20; AT5G41030	Not Available	56.14%
Matrix_252	RAP2.6	Not Available	56.13%
Matrix_505	GATA8	Not Available	56.06%
Matrix_148	WRKY60	Not Available	56.03%
Matrix_504	WRKY40	Not Available	56.01%
Matrix_277	RAP2.6	Not Available	56.00%
Matrix_421	GLK1	Not Available	55.97%
Matrix_4	ARR14	Not Available	55.94%
Matrix_423	AT3G04030	Not Available	55.86%
Matrix_37	GATA27	Not Available	55.86%
Matrix_462	ATERF-8	Not Available	55.66%
Matrix_41	anac058	Not Available	55.52%
Matrix_197	NAP	Not Available	55.52%
Matrix_322	NST3; ANAC015; BRN2	Not Available	55.49%
Matrix_259	AT1G50680; AT1G51120	Not Available	55.39%
Motif_393	AUXREPSIAA4	AuxRE (Auxine responsive element ) of pea PS-IAA4/5 gene; Indoleacetic acid-inducible genes; domain A; TGA1a is preferentially expressed in root tip meristems; TGA1a may contribute to the expression of GST isoenzymes, especially in root tip meristems	55.31%
Matrix_427	ZAT14	Not Available	55.26%
Matrix_416	ASL5	Not Available	55.17%
Matrix_387	ORA47	Not Available	55.05%
Matrix_56	BZIP17; BZIP28; BZIP49	Not Available	55.02%
Matrix_151	ASIL1	Not Available	54.88%
Matrix_272	DEAR4	Not Available	54.78%
Matrix_282	bZIP60	Not Available	54.72%
Matrix_106	AT5G47390	Not Available	54.67%
Matrix_146	ORA47	Not Available	54.62%
Matrix_316	WRKY15; WRKY39; WRKY7; WRKY74	Not Available	54.43%
Motif_592	WRKY43; WRKY38; WRKY26	Arabidopsis WRKY38 and WRKY62 transcription factors interact with histone deacetylase 19 in basal defense. Studies on DNA-binding selectivity of WRKY transcription factors lend structural clues into WRKY-domain function	54.43%
Matrix_253	ETT	Not Available	54.41%
Matrix_87	AT1G19000	Not Available	54.17%
Matrix_57	WIN1; SHN3; SHN2	Not Available	54.14%
Matrix_500	WRKY43	Not Available	54.13%
Matrix_448	ATERF6	Not Available	54.13%
Matrix_138	RRTF1	Not Available	54.11%
Matrix_84	AtGRF6	Not Available	54.05%
Matrix_312	ARF11; MP; ARF6; IAA21; ARF8; ARF4	Not Available	54.03%
Matrix_450	SPL7	Not Available	54.01%
Matrix_231	HDG2; HDG3; ATML1; HB-7	Not Available	53.96%
Matrix_325	WRKY4; WRKY3; WRKY58; ATWRKY34; WRKY20; ATWRKY2	Not Available	53.93%
Matrix_44	CUC3; anac046; NAC3; ANAC087; ATNAC6; CUC2	Not Available	53.87%
Matrix_202	WRKY71; WRKY28; WRKY8	Not Available	53.87%
Matrix_395	AT1G19210; ORA47; AT4G31060; AT5G21960	Not Available	53.83%
Matrix_432	AT1G77920	Not Available	53.78%
Matrix_109	GBF3	Not Available	53.62%
Matrix_171	LBD3; LBD4	Not Available	53.49%
Matrix_321	HRD	Not Available	53.42%
Matrix_454	AT1G77200; ATERF38; AT4G16750; AT5G52020	Not Available	53.38%
Matrix_249	WRKY11	Not Available	53.37%
Matrix_314	WRKY65; WRKY14; WRKY35; WRKY69; WRKY16; ATWRKY52	Not Available	53.26%
Matrix_447	RVE1	Not Available	53.17%
Matrix_119	RRTF1	Not Available	53.16%
Matrix_515	ddf2; ATCBF3; CBF1; CBF4	Not Available	52.91%
Matrix_235	WRKY67; WRKY64; WRKY63; WRKY66	Not Available	52.90%
Matrix_86	CRF5; CRF6; CRF4	Not Available	52.87%
Matrix_166	TGA4	Not Available	52.69%
Matrix_53	MYC3	Not Available	52.69%
Matrix_357	WRKY61; WRKY6; WRKY9; WRKY36; WRKY47; WRKY42; WRKY31; WRKY72	Not Available	52.65%
Matrix_506	DRNL; ATERF-4	Not Available	52.64%
Motif_368	CBF1 BS in cor15a	Determinants in the sequence specific binding of two plant transcription factors, CBF1 and NtERF2, to the DRE and GCC motifs	52.56%
Matrix_392	ARR2	Not Available	52.46%
Matrix_78	AT3G45610	Not Available	52.42%
Matrix_46	AT4G21895	Not Available	52.40%
Matrix_336	AT5G08520	Not Available	52.36%
Motif_684	MNF1ZMPPC1	MNF1 binding site in maize Ppc1 (phosphoenolpyruvate carboxylase) gene promoter; Involved in light induction	52.36%
Matrix_377	AT1G75490; DREB2C; AT2G40350; AT5G18450	Not Available	52.03%
Matrix_142	ZFP8	Not Available	52.03%
Matrix_165	KNAT1	Not Available	51.85%
Matrix_275	ZAP1	Characterization of a zinc-dependent transcriptional activator from Arabidopsis	51.77%
Matrix_161	MYBC1; AT3G10760; LUX; AT5G05090; AT5G59570	Not Available	51.63%
Matrix_289	WRKY25	Not Available	51.61%
Matrix_293	WRKY38	Not Available	51.59%
Matrix_420	ANAC58	Not Available	51.37%
Matrix_174	ZAT2	Not Available	51.27%
Matrix_426	CRF1; CRF2	Not Available	51.26%
Matrix_260	CAMTA3	Not Available	51.03%
Matrix_67	GLK1	Not Available	50.93%
Matrix_228	TGA2	Not Available	50.87%
Matrix_284	KAN2; KAN3; KAN; KAN4	Not Available	50.68%
Matrix_61	ATCBF3	Not Available	50.56%
Motif_402	AtTINY2	Molecular cloning, phylogenetic analysis, expressional profiling and in vitro studies of TINY2 from Arabidopsis thaliana	50.49%
Matrix_80	BIM1	Not Available	50.47%
Matrix_419	TGA9; PAN; TGA6; bZIP65	Not Available	50.34%
Matrix_351	HAT9; ATHB-4; ATHB2; HAT22; HAT14	Not Available	50.31%
Matrix_329	WRKY12	Not Available	50.24%
Matrix_307	RGL2; RGL3	Not Available	50.21%
Matrix_93	YAB5	Not Available	50.20%
Matrix_317	AT1G06070; AT2G31370; AT2G40620	Not Available	50.07%