At5g59000.1 68412.m06688 zinc finger (C3HC4-type RING finger) protein family
Matching miRNAs:
| miRNA name | IGR name | mature miRNA sequence | Targets | Rfam | |
|---|---|---|---|---|---|
| 1 | prec1402 | igr140#chr1#x1=582220#l=2039_509+594 | CTTCATCTTCATCATCATCAG | 76 | |
| 2 | prec1406 | igr140#chr1#x1=582220#l=2039_509+583 | CTTCATCTTCATCATCATCAG | 76 | |
| 3 | prec1410 | igr140#chr1#x1=582220#l=2039_509+589 | CTTCATCTTCATCATCATCAG | 76 | |
| 4 | prec1414 | igr140#chr1#x1=582220#l=2039_509+586 | CTTCATCTTCATCATCATCAG | 76 |
Gene Sequence:
aaagaaagaa aaaaAUGCCU UCUUUUGCUU UUGGAUCUCA UCACCAUUUG GCGAAUCCUA 60 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 CAGACUCGCC GCCGUACUCC GUCGAAAUUA GCAUCGACGG UGACUCCUCC GACUGGGAUU 120 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 CUUUGUCUCA GGUCGAUUUA GAGUCCGGCG GUGUACCGGC GCCGGAGAAA CAGCUACAUU 180 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 CCGGUGGUAA GAAGAGGAGA ACUAGGAGGA GAAAGAGGAG GAAGAAGAAG AAGAAGAAGA 240 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 AAGGUGGAAG AGAUUGCAGG AUCUGUCAUC UUCCUUUAGA GACUAACAAA GAAGCUGAAG 300 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 AUGAAGAUGA AGAAGAAGAA GAUGAUUCUG AUGAUGAUGA AGAUGAAGAA GAUGAAGAAG 360 .......... .......... .......*** ********** ********.. .......... prec1402 .......... .......... .......*** ********** ********.. .......... prec1406 .......... .......... .......*** ********** ********.. .......... prec1410 .......... .......... .......*** ********** ********.. .......... prec1414 AAGAAGAAGA AGAAGAAGAA GAAGAAUAUU AUGGUUUGCC UUUGCAAUUA GGUUGCUCUU 420 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GUAAAGGUGA UUUGGGUGUU GCUCAUAGUA AGUGUGCUGA GACUUGGUUU AAGAUCAAAG 480 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GAAACAUGAC AUGUGAGAUA UGCGGCGCAA UGGCUCUAAA CGUGGCUGGU GAACAAUCUA 540 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 AUCCGGAGAG CACUGCUUCU ACACAUUCAC AAGCAGCUGC GGGACAAUCU CUAACUCAGA 600 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 CAGAGCCACG AGGAAUCUGG CAUGGUCGCC CUGUUAUGAA CUUCUUACUU GCUGCUAUGG 660 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 UCUUCGCCUU CGUUGUUUCU UGGCUUUUUC ACUUCAAAGU CCUCAAGUGA aacguuuucc 720 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 aucucucucu cucucucucu cucucuuucg cccacccgca cgagcucacu cuucuccugu 780 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 ucuugagccg cuugcaaucg cugaaucaau cccuccuguu gcuugauuau ucacacguuu 840 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 uguagcugua aaaacuuggu aguguuuaga uuguuguaac uugugagauu uacauuuugu 900 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 auaauauugu ucucugcucc ggcuucgug 929 .......... .......... ......... prec1402 .......... .......... ......... prec1406 .......... .......... ......... prec1410 .......... .......... ......... prec1414