At5g01380.1 68412.m00046 transcription factor GT-3a
Matching miRNAs:
| miRNA name | IGR name | mature miRNA sequence | Targets | Rfam | |
|---|---|---|---|---|---|
| 1 | prec1402 | igr140#chr1#x1=582220#l=2039_509+594 | CTTCATCTTCATCATCATCAG | 76 | |
| 2 | prec1406 | igr140#chr1#x1=582220#l=2039_509+583 | CTTCATCTTCATCATCATCAG | 76 | |
| 3 | prec1410 | igr140#chr1#x1=582220#l=2039_509+589 | CTTCATCTTCATCATCATCAG | 76 | |
| 4 | prec1414 | igr140#chr1#x1=582220#l=2039_509+586 | CTTCATCTTCATCATCATCAG | 76 |
Gene Sequence:
caacaaaaaa auaaaauuau cucccucuua uuucuucucu ucacgucaca aagacaauuc 60 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 gauuccaaau aAUGGACCGA CGUAACCCUU UCCAACAUCA CCACCACCAC CAUCAGCUUC 120 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 AUCAUCACUU GAUCCAACAG CAACAGCUUC CUCCGCCGCC GCUGAGCACC ACGGCGACGA 180 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 UGGAUCCCGG CGGAGGAGGA GGAGGUGGGG AGAGAAUCCC ACAGUGGAGC AUAGAGGAGA 240 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 CAAAGGAGCU UUUGGCUAUA AGAGAAGAAC UUGAUCAAAC UUUCAUGGAG ACCAAACGUA 300 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 AUAAGCUUCU UUGGGAAGUC GUGGCUGCUA AGAUGGCCGA CAAGGGUUUU GUCCGAAGCG 360 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 CAGAACAAUG UAAGAGCAAG UGGAAGAACC UCGUCACUAG AUACAAGGCG UGUGAGACCA 420 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 CUGAGCCAGA UGCUAUUAGG CAGCAGUUCC CAUUCUACAA UGAGAUUCAG UCGAUUUUUG 480 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 AAGCAAGAAU GCAAAGAAUG CUGUGGUCAG AAGCCACAGA ACCAAGCACU UCCUCGAAGA 540 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GAAAACAUCA UCAAUUUUCA UCUGAUGAUG AAGAAGAAGA AGUUGACGAA CCAAAUCAAG 600 .......... .......... .********* ********** **........ .......... prec1402 .......... .......... .********* ********** **........ .......... prec1406 .......... .......... .********* ********** **........ .......... prec1410 .......... .......... .********* ********** **........ .......... prec1414 AUAUCAACGA GGAAUUAUUG UCUUUAGUAG AGACACAGAA AAGAGAGACA GAAGUGAUUA 660 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 CUACUAGUAC UUCGACCAAU CCAAGAAAAC GUGCAAAAAA AGGAAAAGGC GUUGCGAGUG 720 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GUACGAAAGC UGAAACUGCG GGUAAUACAC UAAAAGAUAU AUUGGAGGAG UUUAUGAGGC 780 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 AAACGGUGAA GAUGGAAAAG GAAUGGAGAG AUGCAUGGGA GAUGAAGGAG AUAGAGAGGG 840 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 AGAAGAGAGA GAAAGAGUGG CGGAGGAGAA UGGCGGAGCU AGAGGAGGAA AGAGCCGCCA 900 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 CAGAAAGGAG GUGGAUGGAG AGAGAGGAAG AGAGACGGUU GAGAGAAGAA GCUAGGGCUC 960 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 AGAAGAGAGA UUCUCUCAUC GAUGCUUUGC UUAAUAGGCU UAAUAGAGAU CAUAAUGAUG 1020 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 AUCAUCAUAA UCAAGGUUUC UAAguucuca uuauuugugu uaagcauaag uuaauuagcu 1080 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 aguuaauuug uuaggcaaau caauuuagau aauauaucua aauuaauguu uguuuuauaa 1140 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 uauuuauaug aacuauugaa auuuccaaaa agaaagauaa auguucaa 1188 .......... .......... .......... .......... ........ prec1402 .......... .......... .......... .......... ........ prec1406 .......... .......... .......... .......... ........ prec1410 .......... .......... .......... .......... ........ prec1414