At3g53310.1 68410.m05444 transcriptional factor B3 family
Matching miRNAs:
| miRNA name | IGR name | mature miRNA sequence | Targets | Rfam | |
|---|---|---|---|---|---|
| 1 | prec1402 | igr140#chr1#x1=582220#l=2039_509+594 | CTTCATCTTCATCATCATCAG | 76 | |
| 2 | prec1406 | igr140#chr1#x1=582220#l=2039_509+583 | CTTCATCTTCATCATCATCAG | 76 | |
| 3 | prec1410 | igr140#chr1#x1=582220#l=2039_509+589 | CTTCATCTTCATCATCATCAG | 76 | |
| 4 | prec1414 | igr140#chr1#x1=582220#l=2039_509+586 | CTTCATCTTCATCATCATCAG | 76 |
Gene Sequence:
aagaaaccca uuucgauucu cucucucucu cucguuucca acaucauucc AUGGCUGACG 60 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 AUAGCGAAUU GUAUCCUCGU UUCUUCAAAG UGUUCCUCGU UGAAUCGGCU UCUGAAUCGU 120 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 UGAUGAUUCC GUUGCCUUUU AUGGCAUUUC UUGCUGAUCC AUUGCCAAAG ACAGUGAAGC 180 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 UCCAAGGUCU UGGAGGAAAA CUUUGGACUG UGAGCUUGAA GAAAAUAAGC GGAGCUGCGU 240 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 AUCUUACUAG AGGAUGGCCA AAAUUCGCAG AGGAACAUGA GCUGAAGAAC GGAGAGUUCA 300 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 UGACAUUUGU GUAUGAUGGU CAUCGUACCU UUGAAGUGAG UGUCUUUGAU CGUUGGGGUA 360 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GCAAAGAGGU CAGAGCUGAA AUACAAGCCA UACCACUUUC UGAUUCUGAU UCUGAUUCUG 420 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 UUGUGGAAGA CGAAAAAGAC UCAACUGAUG UUGUUGAAGA UGAUGAUGAU GAAGAUGAAG 480 .......... .......... .......... .........* ********** ********** prec1402 .......... .......... .......... .........* ********** ********** prec1406 .......... .......... .......... .........* ********** ********** prec1410 .......... .......... .......... .........* ********** ********** prec1414 AUGAAGAUGA AGAUGAUGAU GGUAGCUUUG AUGAAGAUGA AGAAAUCAGC CAGAGUCUUU 540 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 AUCCGAUUGA CGAAGAGACU GCAACCGAUG CUGCAGUUUU UGAAGGGAAC UUGGACGUGG 600 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 AAGCUUUAAC UAAUCCACAC UUUCCGACUA CGCUCAAGAA CAGGAUUUAU GAACUGUUGA 660 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 UCCCAGCCAA UGUGGUGAAG GAUAAUAACC UUGAAUUUGG UUCAUCCAUC AAGUACAUCG 720 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 AUGGAGAAGG AACCUUAGUA GGGCUAAGAG GAAAAUGGGC UGAUAAGAGG GUUUGCUUCA 780 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 AAGGAUGGGA CAGGAUUUGC AGAAGGAACA GGCUCAAAAA GCACCAAGAU ACUGUCGAAU 840 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GCGAGCUUCU UCAUGAUGAC CAGAAGAUGG UUCAUUCCAU CCGAGUCCAU GUCUUGCGUA 900 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GAGAUGCUUG Auccucucac cauucaccac caccaccauc acucucaguc uaucacuauc 960 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 gccguucuca ucaucgcgau cacuauuauc auuaucauca guacuuugac augacuucuu 1020 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 auuauggcuu uuguuuguuu aggaguguuc uuauguuucu ucuuaggcuu uaucuuagua 1080 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 guaccuucuu cauccccaag aaaacuuaug aacuuauugc uguuucuugu uauauuugau 1140 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 augcuaguua uaaaaugcau cuauggcuuu uuau 1174 .......... .......... .......... .... prec1402 .......... .......... .......... .... prec1406 .......... .......... .......... .... prec1410 .......... .......... .......... .... prec1414