At3g44110.2 68410.m04380 DnaJ protein AtJ3
Matching miRNAs:
| miRNA name | IGR name | mature miRNA sequence | Targets | Rfam | |
|---|---|---|---|---|---|
| 1 | prec1402 | igr140#chr1#x1=582220#l=2039_509+594 | CTTCATCTTCATCATCATCAG | 76 | |
| 2 | prec1406 | igr140#chr1#x1=582220#l=2039_509+583 | CTTCATCTTCATCATCATCAG | 76 | |
| 3 | prec1410 | igr140#chr1#x1=582220#l=2039_509+589 | CTTCATCTTCATCATCATCAG | 76 | |
| 4 | prec1414 | igr140#chr1#x1=582220#l=2039_509+586 | CTTCATCTTCATCATCATCAG | 76 |
Gene Sequence:
aacaaaagca aacgcaauuu agccucuuca uaagagagaa guccucucag agaaacggca 60 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 gccacaucaa ccaacccaaa caucgaaaga gagacacuuu ucucucucuc uuucucuauc 120 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 uccuuccaau cucucuaggg uuuucguuac aacggcgaaa agAUGUUCGG UAGAGGACCC 180 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 UCGAAGAAGA GCGACAACAC UAAGUUCUAC GAGAUCUUAG GUGUUCCUAA GAGCGCUUCA 240 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 CCAGAAGAUC UCAAGAAAGC UUACAAAAAA GCCGCUAUCA AGAAUCAUCC UGAUAAGGGU 300 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GGAGAUCCCG AGAAGUUUAA GGAGUUAGCA CAAGCUUAUG AAGUGCUUAG UGACCCGGAG 360 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 AAGCGUGAGA UUUAUGACCA GUAUGGAGAG GAUGCACUCA AGGAAGGAAU GGGUGGUGGA 420 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GGAGGUGGAC AUGAUCCAUU UGAUAUUUUC UCAUCCUUCU UUGGUGGAGG CCCCUUUGGA 480 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GGUAAUACCA GCCGGCAAAG GAGGCAGAGG CGUGGUGAGG AUGUUGUUCA UCCCUUGAAG 540 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GUAUCUCUUG AGGAUGUGUA CCUUGGUACA AUGAAGAAGC UUUCACUUUC UAGGAAUGCU 600 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 CUCUGCUCUA AGUGUAACGG AAAGGGAUCA AAAUCUGGAG CCUCCUUGAA AUGUGGAGGG 660 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 UGUCAGGGAU CUGGUAUGAA GGUGUCUAUU AGGCAGCUUG GACCUGGAAU GAUCCAGCAG 720 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 AUGCAGCAUG CAUGUAAUGA AUGCAAAGGG ACAGGUGAGA CCAUCAAUGA UCGGGACAGG 780 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 UGUCCACAAU GCAAAGGAGA CAAGGUCAUU CCUGAGAAGA AGGUGCUUGA AGUGAAUGUG 840 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GAGAAGGGAA UGCAACACAG UCAGAAGAUC ACAUUUGAAG GACAAGCAGA UGAAGCGCCU 900 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GACACUGUCA CUGGAGAUAU AGUGUUUGUC CUUCAGCAGA AAGAGCACCC AAAGUUCAAG 960 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 AGAAAGGGAG AAGACCUCUU UGUGGAGCAC ACACUUUCUC UAACCGAAGC UUUGUGUGGC 1020 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 UUCCAAUUUG UUCUGACUCA CUUGGAUGGC AGAAGUCUUC UCAUUAAAUC UAAUCCUGGG 1080 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GAGGUCGUGA AACCUGAUUC AUACAAGGCA AUAAGCGAUG AAGGAAUGCC GAUAUACCAG 1140 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 AGGCCAUUCA UGAAGGAUGA GGAGGAAGGC ACAAGCUCAA AGAGAGGCUU AUGAugauga 1200 .......... .......... .......... .......... .......*** ********** prec1402 .......... .......... .......... .......... .......*** ********** prec1406 .......... .......... .......... .......... .......*** ********** prec1410 .......... .......... .......... .......... .......*** ********** prec1414 cgaugaagau gaugaccauc cggguggugc ucaaagggug caaugugccc agcaguaagu 1260 ********.. .......... .......... .......... .......... .......... prec1402 ********.. .......... .......... .......... .......... .......... prec1406 ********.. .......... .......... .......... .......... .......... prec1410 ********.. .......... .......... .......... .......... .......... prec1414 aacuccuuag agagacuuug acccacaugg guuugggcuc caaccaauuu gucucuugcu 1320 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 uuuucauucu aaguguauug gagucuuuau gggaguuugg uacgguuuaa gaauuugccc 1380 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 acuucggugg aacaucgaaa cuuguuuucu cuuuuuccuc ugacuuuaaa aauuaaggcc 1440 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 uuauuacaau uuuguguuuu uucuuuauga uuaaauuugu aguaauuuaa ugucuaagaa 1500 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 cauauauacu guguguuuuc uauauugaua uggauuuaaa auucaauaau uuuuguguuc 1560 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 augcagaaca aaugcugcu 1579 .......... ......... prec1402 .......... ......... prec1406 .......... ......... prec1410 .......... ......... prec1414