At3g01080.1 68410.m00009 WRKY family transcription factor
Matching miRNAs:
| miRNA name | IGR name | mature miRNA sequence | Targets | Rfam | |
|---|---|---|---|---|---|
| 1 | prec1402 | igr140#chr1#x1=582220#l=2039_509+594 | CTTCATCTTCATCATCATCAG | 76 | |
| 2 | prec1406 | igr140#chr1#x1=582220#l=2039_509+583 | CTTCATCTTCATCATCATCAG | 76 | |
| 3 | prec1410 | igr140#chr1#x1=582220#l=2039_509+589 | CTTCATCTTCATCATCATCAG | 76 | |
| 4 | prec1414 | igr140#chr1#x1=582220#l=2039_509+586 | CTTCATCTTCATCATCATCAG | 76 |
Gene Sequence:
AUGGCGGUUG AAGACGAUGU AUCUUUGAUA AGAACGACGA CGUUAGUGGC ACCAACAAGA 60 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 CCCACGAUUA CAGUUCCUCA UAGACCUCCG GCGAUCGAAA CGGCGGCGUA UUUCUUUGGC 120 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GGUGGAGAUG GGCUUAGUCU AAGCCCAGGG CCACUUUCUU UUGUCUCUUC UUUGUUUGUU 180 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GAUAACUUCC CUGACGUCUU GACGCCGGAU AACCAACGGA CGACGUCGUU UACUCAUCUU 240 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 CUCACCUCGC CCAUGUUCUU UCCCCCGCAG UCGUCAGCUC AUACCGGCUU UAUUCAACCA 300 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 CGGCAGCAGU CACAACCGCA ACCACAACGA CCAGACACGU UUCCUCACCA UAUGCCACCA 360 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 UCGACAUCCG UCGCCGUCCA UGGUCGUCAA UCUUUAGACG UUUCACAAGU AGAUCAAAGA 420 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GCUCGAAACC AUUAUAAUAA UCCGGGGAAU AACAAUAAUA ACCGGUCGUA UAACGUUGUG 480 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 AACGUUGAUA AACCGGCGGA UGACGGUUAU AACUGGAGGA AGUACGGACA AAAGCCUAUC 540 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 AAAGGGUGUG AAUAUCCAAG GAGUUAUUAC AAAUGUACAC AUGUUAACUG UCCGGUGAAG 600 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 AAGAAAGUCG AACGGUCAUC GGAUGGACAG AUCACUCAGA UCAUUUACAA AGGUCAACAU 660 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GAUCACGAGA GGCCUCAGAA UCGCCGUGGC GGUGGAGGCA GAGAUUCCAC UGAGGUUGGU 720 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GGUGCAGGGC AAAUGAUGGA AUCUAGUGAU GAUAGUGGUU AUCGUAAGGA UCAUGAUGAU 780 .......... .......... .......... .......... .......... ........** prec1402 .......... .......... .......... .......... .......... ........** prec1406 .......... .......... .......... .......... .......... ........** prec1410 .......... .......... .......... .......... .......... ........** prec1414 GAUGAUGAUG AUGAUGAAGA UGAUGAAGAU CUUCCGGCUU CAAAGAUAAG AAGAAUAGAC 840 ********** *********. .......... .......... .......... .......... prec1402 ********** *********. .......... .......... .......... .......... prec1406 ********** *********. .......... .......... .......... .......... prec1410 ********** *********. .......... .......... .......... .......... prec1414 GGUGUGUCGA CGACUCACCG GACGGUGACC GAGCCUAAGA UUAUCGUUCA GACAAAAAGU 900 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GAAGUCGAUC UUCUCGACGA UGGCUAUAGG UGGCGUAAGU ACGGACAAAA AGUUGUCAAA 960 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GGAAAUCCCC AUCCAAGGAG CUAUUAUAAA UGUACAACGC CAAAUUGUAC GGUCCGUAAA 1020 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 CAUGUAGAGA GAGCUUCCAC GGAUGCUAAG GCUGUGAUUA CAACUUACGA AGGUAAACAC 1080 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 AAUCACGAUG UCCCUGCCGC UAGAAACGGU ACCGCGGCAG CAACCGCAGC UGCGGUGGGG 1140 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 CCGUCUGACC ACCAUCGUAU GAGAUCAAUG UCGGGGAACA AUAUGCAACA ACAUAUGAGU 1200 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 UUCGGUAACA AUAAUAACAC AGGCCAAUCU CCGGUUCUUU UGAGGUUGAA AGAAGAGAAA 1260 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 AUCACAAUUU GA 1272 .......... .. prec1402 .......... .. prec1406 .......... .. prec1410 .......... .. prec1414