At1g48400.1 68408.m04954 F-box protein family
Matching miRNAs:
| miRNA name | IGR name | mature miRNA sequence | Targets | Rfam | |
|---|---|---|---|---|---|
| 1 | prec1402 | igr140#chr1#x1=582220#l=2039_509+594 | CTTCATCTTCATCATCATCAG | 76 | |
| 2 | prec1406 | igr140#chr1#x1=582220#l=2039_509+583 | CTTCATCTTCATCATCATCAG | 76 | |
| 3 | prec1410 | igr140#chr1#x1=582220#l=2039_509+589 | CTTCATCTTCATCATCATCAG | 76 | |
| 4 | prec1414 | igr140#chr1#x1=582220#l=2039_509+586 | CTTCATCTTCATCATCATCAG | 76 |
Gene Sequence:
AUGGCUAUGA UGAGAACUUC UCCUAGAGAU UCGAUAAGCA AUUUGCCAGA UGAGAUUCUU 60 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GGCAAAAUCU UGUCUUUGCU CCCGACAAAA GUGGCUGCUU CCACAUCGGU UCUGUCCAAG 120 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 AGGUGGAGGA AUCUGUUGGG UCUUGUAGAC AACCUCUGCU UUGAUGAGUC GAUGGUUGUU 180 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 UAUCCCAACG AAGAAGAAGA AACAAGUGGU UCACUUCGCU UCUGUGAUUU CGUAGACAAG 240 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 ACAUUUGCUC UGUUAAGCAA UUCUCACAUC AAGAAGUUCU CUCUGUCUCG UGUAUAUAAG 300 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 UAUAACGAUG AUGUAGACGG UAUGGUCCGG CGUUGGAUUC GGACUGUAAU GGAACGCGGU 360 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 UUAUUGGAAA UACACUUGCA CGCCACCCCC AUGUCUUUUG UUGCCAUAGA AACUAAGCUG 420 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 UUAACGAGCA ACACACUGGU UAAGCUCACA CUAUCCGCUC GAUGUUUUGU UGAAGUAGAG 480 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 CGUGUGUUUU UCCCUGCCCU CAAAUCACUU UCUCUCUUCU CAAUUCUGGG UGAUUAUACC 540 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 AACUAUAUAC GGCUCAUCGA UGGCUGCCCU GUGUUGGAAG AAUUAUACAU GCGUGAUGGU 600 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GAUUAUCCGU UCUUGCGGCU UACUUGUGGU ACCAACGUGG AAAGUGCAUC CCUCAAGCGA 660 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 CUUGUGAUUU UUACCCAUAA UCCAAAUGAA AUGAUUUGGC ACGAACUGAU UUAUUUUGAA 720 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GCACCAAGUC UUGUCUACCU UGACUAUUCC AGUUAUGUCU CGGCUAAGUA UGAUGUUGUU 780 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GAUUUCGAUU UGCUUGUCGA AGCCAGGCUG AGUCUCAGGU UAUGGGUGUC AACUAACGAU 840 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 UAUGAUUAUU CUGAUGAUGA UGAUGAUGAU GAUGAUGAUG AUGAUGAUGA UGAUGAUGAU 900 .......... ********** ********** *......... .......... .......... prec1402 .......... ********** ********** *......... .......... .......... prec1406 .......... ********** ********** *......... .......... .......... prec1410 .......... ********** ********** *......... .......... .......... prec1414 GAUGAUGAUG AUGAUGAUGA UGAUGAUGAU GAUGAUGAUG AUGAUGAUGA UGAUGAUGAU 960 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GAUGAUGAUG AUGAUGGUGA UUAUUAUAUU GUAGAACCAA AGGCGCCUAU AUUUGGUGAU 1020 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GUUACAGAAC UACUUGCGGC UAUACGCAAC AUUACGACCC UUCACUUGUC UCCUGAUUCC 1080 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 CUUGAGGUGU UUCAUUUCUG CUGUAAAUCC AUGCCCGUGU UCAACAACCU CCUUAAUUUA 1140 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 UCUAUUGAGA GUAACAAGGA UAAAGGUUGG CAAGUAAUGC CACUUCUCCU CAAGAGUUGU 1200 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 CCAAAUCUAC ACACCUUAGU CAUCAAGGGU CUUGUCCACA GAGUAACUAG UAGAUGUGGA 1260 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GAUGCAUGCG CUUGCAUACC UAAGAAGCAG AGGAAGAUUG UACAGAAAGA AGAGGCAUUA 1320 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 UGUUGUCUGC GGACAUGUCA AGUGAAGGUG CUACAGAUUU CAGAGUAUGG AGGUUAUUUU 1380 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 CAAGAGCUGA AACAGAUGAG ACAUUUCUUG GGCAAGUUGG AAUGUCUUGA AACCGUGAAA 1440 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GUUGGUGUUC ACGCAGAAAA CAACAACAAC AGUGAGUUCU UGCGAGCUAA UGUGCUGACU 1500 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 CUUCCCAGAG UUUCAGCAAA GUGCAACGUC CACUUCAUCU GA 1542 .......... .......... .......... .......... .. prec1402 .......... .......... .......... .......... .. prec1406 .......... .......... .......... .......... .. prec1410 .......... .......... .......... .......... .. prec1414