View conserved binding sites

CTP synthase
Binding siteNameDescriptionLocationPosition
Matrix_101ERF5Not availableUpstream-520
Matrix_119RRTF1Not availableUpstream-519
Matrix_138RRTF1Not availableUpstream-519
Matrix_146ORA47Not availableUpstream-520
Matrix_147ERF3;AT1G80580Not availableUpstream-520
Matrix_155RAP2.6;ERF110;ABR1Not availableUpstream-521
Matrix_190ATERF1Not availableUpstream-362
Matrix_224ERF1Not availableUpstream-519
Matrix_234RAP2.3Not availableUpstream-520
Matrix_243RAP2.12;RAP2.2Not availableUpstream-521
Matrix_252RAP2.6Not availableUpstream-520
Matrix_261ATERF-1Not availableUpstream-520
Matrix_272DEAR4Not availableUpstream-520
Matrix_287ERF2Not availableUpstream-520
Matrix_288RAP2.3Not availableUpstream-519
Matrix_295ERF1Not availableUpstream-520
Matrix_321HRDNot availableUpstream-520
Matrix_326AT5G07310;Rap2.6L;AT5G61890Not availableUpstream-519
Matrix_334AT3G23230Not availableUpstream-521
Matrix_343AT2G33710Not availableUpstream-520
Matrix_355ERF10;ERF11Not availableUpstream-519
Matrix_360ORA59Not availableUpstream-520
Matrix_363RAP2.3Not availableUpstream-519
Matrix_377AT1G75490;DREB2C;AT2G40350;AT5G18450Not availableUpstream-520
Matrix_378ATERF1Not availableUpstream-520
Matrix_401MYB55Not availableUpstream-522
Matrix_406ATERF-7Not availableUpstream-518
Matrix_409DEAR3Not availableUpstream-519
Matrix_426CRF1;CRF2Not availableUpstream-521
Matrix_45DRNNot availableUpstream-520
Matrix_452MYB46Not availableUpstream-522
Matrix_462ATERF-8Not availableUpstream-518
Matrix_473RRTF1Not availableUpstream-520
Matrix_484ATERF13Not availableUpstream-520
Matrix_493AT1G22985;AT1G71130Not availableUpstream-520
Matrix_496ATMYB15Not availableUpstream-522
Matrix_50ATERF14;AT5G43410Not availableUpstream-519
Matrix_506DRNL;ATERF-4Not availableUpstream-521
Matrix_517ERF12Not availableUpstream-520
Matrix_57WIN1;SHN3;SHN2Not availableUpstream-519
Matrix_84AtGRF6Not availableUpstream-371
Matrix_86CRF5;CRF6;CRF4Not availableUpstream-521
Matrix_91CRF3Not availableUpstream-520
Motif_155NODCON1GMOne of two putative nodulin consensus sequences; See also NODCON2GM; One of the consensus sequence motifs of organ-specific elements (OSE) characteristic of the promoters activated in infected cells of root nodulesUpstream-168
Motif_313ERF1 BS in AtCHI-BCore of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperatureUpstream-520
Motif_365ARF1 binding site motifARF (auxin response factor) binding site found in the promoters of primary/early auxin response genes of Arabidopsis thaliana; AuxRE;Binding site of Arabidopsis ARF1 (Auxin response factor1); Sequence found in NDE element in Soybean SAUR (Small Auxin-Up RNA) 15A gene promoter;Found in D1 or D4 element in Soybean GH3 promoter; This element was enriched in the 5'-flanking region of genes up-regulated by both IAA and BL;Dimerization and DNA binding of auxin response factorsUpstream-100
Motif_536TBOXATGAPBTbox found in the Arabidopsis thaliana GAPB gene promoter; Located between -94 and -89 (T1) and also between -84 and -79 (T2); Mutations in the Tbox resulted in reductions of light-activated gene transcription; GAPB encodes the B subunit of chloroplast glyceraldehyde-3-phosphate dehydrogenase(GADPH) of A.T.; Promoter analysis of the nuclear gene encoding the chloroplast glyceraldehyde-3-phosphate dehydrogenase B subunit of Arabidopsis thalianaUpstream-175
Motif_562-300CORETGTAAAG core motif in -300 elements of alpha-zein genes of maize; -300 element core; prolamin box; P-box; Binds with P-box binding factor (PBF); Binds with BPBF (Barley PBF); PBF is a DNA-binding protein of the DOF class of transcription factorsUpstream-170
Motif_591CBFHVBinding site of barley CBF1, and also of barley CBF2; CBF = C-repeat (CRT) binding factors; CBFs are also known as dehydration-responsive element (DRE) binding proteins (DREBs)Upstream-146
Motif_615MARTBOXT-Box; Motif found in SAR (scaffold attachment region; or matrix attachment region, MAR)Upstream-699