View conserved binding sites


Gene
BR09G30510
Description
Microtubule-associated protein SPIRAL2-like
Alias
Bra024646;Bra024646
Binding siteNameDescriptionLocationPosition
Matrix_119RRTF1Not availableUpstream-84
Matrix_138RRTF1Not availableUpstream-84
Matrix_224ERF1Not availableUpstream-84
Matrix_321HRDNot availableUpstream-85
Matrix_334AT3G23230Not availableUpstream-85
Upstream-86
Matrix_48PINot availableUpstream-152
Upstream-1288
Matrix_506DRNL;ATERF-4Not availableUpstream-85
Upstream-86
Motif_150RBCSCONSENSUSrbcS general consensus sequence; AATCCAA or AATCCAACUpstream-709
Upstream-1970
Motif_313ERF1 BS in AtCHI-BCore of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperatureUpstream-85
Motif_450E2FCONSENSUSE2F consensus sequence of all different E2F-DP-binding motifs that were experimentally verified in plantsUpstream-478