Binding site page : Motif_354


Identifier
Motif_354
Name
VSF1PVGRP18
Description
VSF-1 binding site in French bean grp1.8 gene promoter; VSF-1 is a tomato bZIP transcription factor; VSF-1 binding site is found in 28 bp vs-1 element; This sequence controls vascular gene expression in transgenic tobacco; VS-1 found in bean grp1.8 gene promoter; Located between -203 and -176; Partially overlaps with NRE; Confers xylem-specific expression
Number of genes
28
Sequence
GCTCCGTTG
Positional Weight Matrix

Binding site distribution per species

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Binding site distribition per location

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Gene List

Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 28 total, starting on record 1, ending on 20

gene_id species strand chr type
GM01G41915 gma + Gm01 coding
GM10G34390 gma + Gm10 coding
GM11G03450 gma - Gm11 coding
GM10G42130 gma - Gm10 coding
GM20G24920 gma + Gm20 coding
GM16G34770 gma - Gm16 coding
PPE_002G02240 ppe - scaffold_2 coding
PPE_005G16720 ppe - scaffold_5 coding
PPE_008G23020 ppe + scaffold_8 coding
BR00G11510 bra - Scaffold000352 coding
BR01G09870 bra + A01 coding
BR06G09570 bra + A06 coding
BR00G11520 bra - Scaffold000352 coding
BR07G11710 bra - A07 coding
EG0009G19950 egr - scaffold_9 coding
EG0006G32620 egr + scaffold_6 coding
VV00G00330 vvi + chr12_random coding
VV04G11040 vvi + chr4 coding
VV08G04360 vvi - chr8 coding
VV18G05980 vvi + chr18 coding

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