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Interactive Phylogenetics Module
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Family
ORTHO02SEM000044
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
CC00G01680
Cyclotella cryptica
CC00G06050
Cyclotella cryptica
CC00G102580
Cyclotella cryptica
CC00G102590
Cyclotella cryptica
CC00G102600
Cyclotella cryptica
CC00G105800
Cyclotella cryptica
CC00G107400
Cyclotella cryptica
CC00G108290
Cyclotella cryptica
CC00G108670
Cyclotella cryptica
CC00G114170
Cyclotella cryptica
CC00G117300
Cyclotella cryptica
CC00G118320
Cyclotella cryptica
CC00G123970
Cyclotella cryptica
CC00G125540
Cyclotella cryptica
CC00G12570
Cyclotella cryptica
CC00G131730
Cyclotella cryptica
CC00G134280
Cyclotella cryptica
CC00G135290
Cyclotella cryptica
CC00G135450
Cyclotella cryptica
CC00G13990
Cyclotella cryptica
CC00G144050
Cyclotella cryptica
CC00G149670
Cyclotella cryptica
CC00G150970
Cyclotella cryptica
CC00G153250
Cyclotella cryptica
CC00G15390
Cyclotella cryptica
CC00G158050
Cyclotella cryptica
CC00G158110
Cyclotella cryptica
CC00G159500
Cyclotella cryptica
CC00G160460
Cyclotella cryptica
CC00G168590
Cyclotella cryptica
CC00G171120
Cyclotella cryptica
CC00G172480
Cyclotella cryptica
CC00G174220
Cyclotella cryptica
CC00G174360
Cyclotella cryptica
CC00G178670
Cyclotella cryptica
CC00G179250
Cyclotella cryptica
CC00G180440
Cyclotella cryptica
CC00G181590
Cyclotella cryptica
CC00G183950
Cyclotella cryptica
CC00G184350
Cyclotella cryptica
CC00G194440
Cyclotella cryptica
CC00G194650
Cyclotella cryptica
CC00G195070
Cyclotella cryptica
CC00G196270
Cyclotella cryptica
CC00G196840
Cyclotella cryptica
CC00G198360
Cyclotella cryptica
CC00G199930
Cyclotella cryptica
CC00G202260
Cyclotella cryptica
CC00G202480
Cyclotella cryptica
CC00G205470
Cyclotella cryptica
CC00G207520
Cyclotella cryptica
CC00G31070
Cyclotella cryptica
CC00G32520
Cyclotella cryptica
CC00G36150
Cyclotella cryptica
CC00G36160
Cyclotella cryptica
CC00G39130
Cyclotella cryptica
CC00G39140
Cyclotella cryptica
CC00G40060
Cyclotella cryptica
CC00G44410
Cyclotella cryptica
CC00G44930
Cyclotella cryptica
CC00G46290
Cyclotella cryptica
CC00G47210
Cyclotella cryptica
CC00G52490
Cyclotella cryptica
CC00G52500
Cyclotella cryptica
CC00G53130
Cyclotella cryptica
CC00G58450
Cyclotella cryptica
CC00G58700
Cyclotella cryptica
CC00G59270
Cyclotella cryptica
CC00G65090
Cyclotella cryptica
CC00G66530
Cyclotella cryptica
CC00G69100
Cyclotella cryptica
CC00G69540
Cyclotella cryptica
CC00G69550
Cyclotella cryptica
CC00G73790
Cyclotella cryptica
CC00G77330
Cyclotella cryptica
CC00G79850
Cyclotella cryptica
CC00G79930
Cyclotella cryptica
CC00G79990
Cyclotella cryptica
CC00G82730
Cyclotella cryptica
CC00G85000
Cyclotella cryptica
CC00G88000
Cyclotella cryptica
CC00G90670
Cyclotella cryptica
CC00G94690
Cyclotella cryptica
CC00G94700
Cyclotella cryptica
Sro132_g062650
Seminavis robusta
Sro1837_g300760
Seminavis robusta
Sro2279_g321751
Seminavis robusta
Sro2814_g337700
Seminavis robusta
Sro754_g197490
Seminavis robusta
fso01140
Fistulifera solaris
fso106470
Fistulifera solaris
fso179840
Fistulifera solaris
fso19520
Fistulifera solaris
fso41750
Fistulifera solaris
fso50240
Fistulifera solaris
fso67030
Fistulifera solaris
gene10283
Fragilariopsis cylindrus
gene10720
Fragilariopsis cylindrus
gene10952
Fragilariopsis cylindrus
gene12535
Fragilariopsis cylindrus
gene12547
Fragilariopsis cylindrus
gene13033
Fragilariopsis cylindrus
gene1304
Fragilariopsis cylindrus
gene13423
Fragilariopsis cylindrus
gene13793
Fragilariopsis cylindrus
gene15671
Fragilariopsis cylindrus
gene15717
Fragilariopsis cylindrus
gene16671
Fragilariopsis cylindrus
gene1766
Fragilariopsis cylindrus
gene18645
Fragilariopsis cylindrus
gene1921
Fragilariopsis cylindrus
gene19350
Fragilariopsis cylindrus
gene2054
Fragilariopsis cylindrus
gene2169
Fragilariopsis cylindrus
gene3735
Fragilariopsis cylindrus
gene4103
Fragilariopsis cylindrus
gene4392
Fragilariopsis cylindrus
gene4504
Fragilariopsis cylindrus
gene4699
Fragilariopsis cylindrus
gene4700
Fragilariopsis cylindrus
gene4701
Fragilariopsis cylindrus
gene4939
Fragilariopsis cylindrus
gene5185
Fragilariopsis cylindrus
gene5199
Fragilariopsis cylindrus
gene6113
Fragilariopsis cylindrus
gene6209
Fragilariopsis cylindrus
gene7846
Fragilariopsis cylindrus
gene8231
Fragilariopsis cylindrus
gene8416
Fragilariopsis cylindrus
gene9752
Fragilariopsis cylindrus
ps00G00160
Pseudo-nitzschia multiseries
ps00G05130
Pseudo-nitzschia multiseries
ps00G100040
Pseudo-nitzschia multiseries
ps00G100070
Pseudo-nitzschia multiseries
ps00G103100
Pseudo-nitzschia multiseries
ps00G11120
Pseudo-nitzschia multiseries
ps00G111400
Pseudo-nitzschia multiseries
ps00G11630
Pseudo-nitzschia multiseries
ps00G117010
Pseudo-nitzschia multiseries
ps00G117380
Pseudo-nitzschia multiseries
ps00G119560
Pseudo-nitzschia multiseries
ps00G120200
Pseudo-nitzschia multiseries
ps00G12290
Pseudo-nitzschia multiseries
ps00G123300
Pseudo-nitzschia multiseries
ps00G123310
Pseudo-nitzschia multiseries
ps00G123580
Pseudo-nitzschia multiseries
ps00G125920
Pseudo-nitzschia multiseries
ps00G125930
Pseudo-nitzschia multiseries
ps00G127900
Pseudo-nitzschia multiseries
ps00G128300
Pseudo-nitzschia multiseries
ps00G128520
Pseudo-nitzschia multiseries
ps00G130670
Pseudo-nitzschia multiseries
ps00G134500
Pseudo-nitzschia multiseries
ps00G136620
Pseudo-nitzschia multiseries
ps00G137670
Pseudo-nitzschia multiseries
ps00G14360
Pseudo-nitzschia multiseries
ps00G144280
Pseudo-nitzschia multiseries
ps00G144320
Pseudo-nitzschia multiseries
ps00G144330
Pseudo-nitzschia multiseries
ps00G14740
Pseudo-nitzschia multiseries
ps00G15020
Pseudo-nitzschia multiseries
ps00G15030
Pseudo-nitzschia multiseries
ps00G150760
Pseudo-nitzschia multiseries
ps00G154740
Pseudo-nitzschia multiseries
ps00G155190
Pseudo-nitzschia multiseries
ps00G159770
Pseudo-nitzschia multiseries
ps00G162670
Pseudo-nitzschia multiseries
ps00G165430
Pseudo-nitzschia multiseries
ps00G166500
Pseudo-nitzschia multiseries
ps00G169570
Pseudo-nitzschia multiseries
ps00G174140
Pseudo-nitzschia multiseries
ps00G175350
Pseudo-nitzschia multiseries
ps00G175360
Pseudo-nitzschia multiseries
ps00G180600
Pseudo-nitzschia multiseries
ps00G181620
Pseudo-nitzschia multiseries
ps00G183280
Pseudo-nitzschia multiseries
ps00G186150
Pseudo-nitzschia multiseries
ps00G190690
Pseudo-nitzschia multiseries
ps00G194820
Pseudo-nitzschia multiseries
ps00G195090
Pseudo-nitzschia multiseries
ps00G195340
Pseudo-nitzschia multiseries
ps00G195350
Pseudo-nitzschia multiseries
ps00G195360
Pseudo-nitzschia multiseries
ps00G29810
Pseudo-nitzschia multiseries
ps00G34230
Pseudo-nitzschia multiseries
ps00G35910
Pseudo-nitzschia multiseries
ps00G36470
Pseudo-nitzschia multiseries
ps00G36800
Pseudo-nitzschia multiseries
ps00G43200
Pseudo-nitzschia multiseries
ps00G43890
Pseudo-nitzschia multiseries
ps00G52370
Pseudo-nitzschia multiseries
ps00G52860
Pseudo-nitzschia multiseries
ps00G62730
Pseudo-nitzschia multiseries
ps00G64620
Pseudo-nitzschia multiseries
ps00G80840
Pseudo-nitzschia multiseries
ps00G81670
Pseudo-nitzschia multiseries
ps00G83830
Pseudo-nitzschia multiseries
ps00G92490
Pseudo-nitzschia multiseries
ps00G92530
Pseudo-nitzschia multiseries
ps00G94040
Pseudo-nitzschia multiseries
ptri03420
Phaeodactylum tricornutum
ptri06840
Phaeodactylum tricornutum
ptri102080
Phaeodactylum tricornutum
ptri102180
Phaeodactylum tricornutum
ptri102420
Phaeodactylum tricornutum
ptri103400
Phaeodactylum tricornutum
ptri123320
Phaeodactylum tricornutum
ptri142450
Phaeodactylum tricornutum
ptri153780
Phaeodactylum tricornutum
ptri158650
Phaeodactylum tricornutum
ptri158730
Phaeodactylum tricornutum
ptri16340
Phaeodactylum tricornutum
ptri179870
Phaeodactylum tricornutum
ptri179890
Phaeodactylum tricornutum
ptri197170
Phaeodactylum tricornutum
ptri197270
Phaeodactylum tricornutum
ptri211530
Phaeodactylum tricornutum
ptri21310
Phaeodactylum tricornutum
ptri21330
Phaeodactylum tricornutum
ptri214330
Phaeodactylum tricornutum
ptri232670
Phaeodactylum tricornutum
ptri232690
Phaeodactylum tricornutum
ptri240440
Phaeodactylum tricornutum
ptri244570
Phaeodactylum tricornutum
ptri26670
Phaeodactylum tricornutum
ptri26830
Phaeodactylum tricornutum
ptri43050
Phaeodactylum tricornutum
ptri48510
Phaeodactylum tricornutum
ptri48570
Phaeodactylum tricornutum
ptri51910
Phaeodactylum tricornutum
ptri61420
Phaeodactylum tricornutum
ptri67400
Phaeodactylum tricornutum
ptri76360
Phaeodactylum tricornutum
ptri79920
Phaeodactylum tricornutum
ptri81600
Phaeodactylum tricornutum
ptri85160
Phaeodactylum tricornutum
ptri85540
Phaeodactylum tricornutum
ptri89360
Phaeodactylum tricornutum
ptri89380
Phaeodactylum tricornutum
ptri89410
Phaeodactylum tricornutum
ptri93830
Phaeodactylum tricornutum
ptri93850
Phaeodactylum tricornutum
ptri97250
Phaeodactylum tricornutum
sya00G112200
Synedra acus
sya00G125100
Synedra acus
sya00G125110
Synedra acus
sya00G131630
Synedra acus
sya00G135000
Synedra acus
sya00G178150
Synedra acus
sya00G182080
Synedra acus
sya00G190390
Synedra acus
sya00G198600
Synedra acus
sya00G21040
Synedra acus
sya00G215690
Synedra acus
sya00G216040
Synedra acus
sya00G216060
Synedra acus
sya00G232430
Synedra acus
sya00G256310
Synedra acus
sya00G265420
Synedra acus
sya00G268590
Synedra acus
sya00G29840
Synedra acus
sya00G31640
Synedra acus
sya00G32100
Synedra acus
sya00G36350
Synedra acus
sya00G58860
Synedra acus
sya00G59060
Synedra acus
sya00G59130
Synedra acus
sya00G62680
Synedra acus
sya00G62690
Synedra acus
sya00G68240
Synedra acus
sya00G80940
Synedra acus
sya00G90120
Synedra acus
sya00G90920
Synedra acus
sya00G94770
Synedra acus
tho108700
Thalassiosira oceanica
tho132360
Thalassiosira oceanica
tho143060
Thalassiosira oceanica
tho144280
Thalassiosira oceanica
tho147040
Thalassiosira oceanica
tho160640
Thalassiosira oceanica
tho175820
Thalassiosira oceanica
tho183220
Thalassiosira oceanica
tho183240
Thalassiosira oceanica
tho187900
Thalassiosira oceanica
tho198720
Thalassiosira oceanica
tho22300
Thalassiosira oceanica
tho240800
Thalassiosira oceanica
tho256200
Thalassiosira oceanica
tho270040
Thalassiosira oceanica
tho270060
Thalassiosira oceanica
tho280940
Thalassiosira oceanica
tho302740
Thalassiosira oceanica
tho319880
Thalassiosira oceanica
tho339420
Thalassiosira oceanica
tho364060
Thalassiosira oceanica
tho364080
Thalassiosira oceanica
tho408160
Thalassiosira oceanica
tho421040
Thalassiosira oceanica
tho472240
Thalassiosira oceanica
tho477660
Thalassiosira oceanica
tho484820
Thalassiosira oceanica
tho484840
Thalassiosira oceanica
tho48640
Thalassiosira oceanica
tho489180
Thalassiosira oceanica
tho500340
Thalassiosira oceanica
tho530240
Thalassiosira oceanica
tho533400
Thalassiosira oceanica
tho538240
Thalassiosira oceanica
tho539400
Thalassiosira oceanica
tho539560
Thalassiosira oceanica
tho558560
Thalassiosira oceanica
tho569240
Thalassiosira oceanica
tho581260
Thalassiosira oceanica
tho601620
Thalassiosira oceanica
tho602640
Thalassiosira oceanica
tho608500
Thalassiosira oceanica
tho636360
Thalassiosira oceanica
tho648680
Thalassiosira oceanica
tho66240
Thalassiosira oceanica
tho669700
Thalassiosira oceanica
tho87460
Thalassiosira oceanica
tps00100
Thalassiosira pseudonana
tps12310
Thalassiosira pseudonana
tps207850
Thalassiosira pseudonana
tps29570
Thalassiosira pseudonana
tps29590
Thalassiosira pseudonana
tps79540
Thalassiosira pseudonana
tps83360
Thalassiosira pseudonana
tps84210
Thalassiosira pseudonana
Organisms
Phaeodactylum tricornutum (43 genes)
Thalassiosira pseudonana (8 genes)
Thalassiosira oceanica (47 genes)
Pseudo-nitzschia multiseries (70 genes)
Fistulifera solaris (7 genes)
Fragilariopsis cylindrus (34 genes)
Cyclotella cryptica (84 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (5 genes)
Synedra acus (31 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing