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Gene family finder
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Colinear region finder
Localization
Functional clusters
WGMapping
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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Family
HOM02SEM004079
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
fso87180
Fistulifera solaris
fso188670
Fistulifera solaris
CC00G34190
Cyclotella cryptica
fso156280
Fistulifera solaris
tps226020
Thalassiosira pseudonana
Sro670_g184740
Seminavis robusta
tho368220
Thalassiosira oceanica
Sro670_g184730
Seminavis robusta
Sro73_g040540
Seminavis robusta
Sro13_g010210
Seminavis robusta
gene11584
Fragilariopsis cylindrus
tps226040
Thalassiosira pseudonana
CC00G143780
Cyclotella cryptica
CC00G201460
Cyclotella cryptica
Sro1530_g280110
Seminavis robusta
fso157060
Fistulifera solaris
CC00G116530
Cyclotella cryptica
Sro1008_g230580
Seminavis robusta
ps00G175920
Pseudo-nitzschia multiseries
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (6 genes)
Synedra acus (0 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
No editing