Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Family
HOM02SEM000837
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
AT3G53210
Arabidopsis thaliana
AT5G47470
Arabidopsis thaliana
AA0001G04230
Aureococcus anophagefferens
AT1G44800
Arabidopsis thaliana
AT4G28040
Arabidopsis thaliana
Pp3c5_11100
Physcomitrella patens
AT2G40900
Arabidopsis thaliana
AT3G28080
Arabidopsis thaliana
Pp3c4_12350
Physcomitrella patens
AT2G37460
Arabidopsis thaliana
AT1G43650
Arabidopsis thaliana
AT1G11460
Arabidopsis thaliana
AT5G40230
Arabidopsis thaliana
AT3G18200
Arabidopsis thaliana
AT3G30340
Arabidopsis thaliana
AT3G28070
Arabidopsis thaliana
AT1G01070
Arabidopsis thaliana
AT3G28130
Arabidopsis thaliana
AT5G13670
Arabidopsis thaliana
Pp3c10_24460
Physcomitrella patens
AT3G56620
Arabidopsis thaliana
AT3G45870
Arabidopsis thaliana
AT5G40240
Arabidopsis thaliana
AT1G68170
Arabidopsis thaliana
AT5G45370
Arabidopsis thaliana
AT4G30420
Arabidopsis thaliana
AT4G16620
Arabidopsis thaliana
AT3G28060
Arabidopsis thaliana
Pp3c4_21140
Physcomitrella patens
AT1G70260
Arabidopsis thaliana
AT2G39510
Arabidopsis thaliana
AT1G09380
Arabidopsis thaliana
AT3G28050
Arabidopsis thaliana
AT4G08300
Arabidopsis thaliana
Pp3c12_8230
Physcomitrella patens
AT5G07050
Arabidopsis thaliana
AT1G11450
Arabidopsis thaliana
AT3G28100
Arabidopsis thaliana
AT4G19185
Arabidopsis thaliana
AT2G37450
Arabidopsis thaliana
AT5G40210
Arabidopsis thaliana
AT4G24980
Arabidopsis thaliana
AT1G25270
Arabidopsis thaliana
AT4G01440
Arabidopsis thaliana
AT1G21890
Arabidopsis thaliana
Pp3c23_13280
Physcomitrella patens
Pp3c20_20860
Physcomitrella patens
AT1G60050
Arabidopsis thaliana
Pp3c12_19870
Physcomitrella patens
AT4G15540
Arabidopsis thaliana
AT4G01430
Arabidopsis thaliana
AT4G01450
Arabidopsis thaliana
AT1G75500
Arabidopsis thaliana
AT4G08290
Arabidopsis thaliana
AT5G64700
Arabidopsis thaliana
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (46 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (0 genes)
Synedra acus (0 genes)
Physcomitrella patens (8 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing