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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
tps228330
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
tps228330
Thalassiosira pseudonana
4.5e-132
471.9
222
100.0
tho133420
Thalassiosira oceanica
1.1e-69
264.6
221
56.6
tho391180
Thalassiosira oceanica
1.1e-42
174.9
214
44.9
CC00G198660
Cyclotella cryptica
1.9e-42
174.1
213
42.7
tho27000
Thalassiosira oceanica
2.8e-41
170.2
213
42.7
Sro14_g010800
Seminavis robusta
9.0e-40
165.2
217
40.6
tho122860
Thalassiosira oceanica
1.3e-35
151.4
223
38.1
tho325920
Thalassiosira oceanica
1.3e-35
151.4
223
38.1
sya00G234800
Synedra acus
1.7e-30
134.4
211
37.9
Sro857_g211650
Seminavis robusta
6.5e-30
132.5
214
34.1
tps229470
Thalassiosira pseudonana
1.9e-29
131.0
175
40.6
sya00G261120
Synedra acus
2.5e-29
130.6
210
37.6
ps00G158930
Pseudo-nitzschia multiseries
1.6e-28
127.9
222
35.1
PSNMU-V1.4_AUG-EV-PASAV3_0073570
Pseudo-nitzschia multistriata
3.4e-23
110.2
250
32.0
sya00G234780
Synedra acus
1.9e-21
104.4
146
41.1
gene3338
Fragilariopsis cylindrus
3.2e-21
103.6
250
31.2
ENSG00000158516
Homo sapiens
7.0e-16
85.9
204
30.9
ENSG00000128510
Homo sapiens
3.5e-15
83.6
194
28.9
WBGene00021984
Caenorhabditis elegans
1.3e-14
81.6
191
26.2
CC00G114280
Cyclotella cryptica
1.9e-13
77.8
134
35.8
WBGene00008521
Caenorhabditis elegans
4.2e-13
76.6
197
31.5
CC00G01940
Cyclotella cryptica
9.4e-13
75.5
84
46.4
FBgn0029807
Drosophila melanogaster
3.6e-12
73.6
176
34.7
gene2505
Fragilariopsis cylindrus
3.7e-09
63.5
107
34.6
ENSG00000158525
Homo sapiens
4.1e-08
60.1
128
33.6
ENSG00000108582
Homo sapiens
7.7e-07
55.8
83
38.6
CC00G35540
Cyclotella cryptica
1.0e-06
55.5
43
55.8
FBgn0035779
Drosophila melanogaster
1.7e-06
54.7
208
25.5
FBgn0033774
Drosophila melanogaster
2.9e-06
53.9
90
33.3
FBgn0004648
Drosophila melanogaster
2.9e-06
53.9
112
31.2
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (5 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (4 genes)
Drosophila melanogaster (4 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (2 genes)
Synedra acus (3 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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