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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
tho290880
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
tho290880
Thalassiosira oceanica
2.6e-105
382.9
207
100.0
tps208450
Thalassiosira pseudonana
1.1e-76
287.7
210
74.3
CC00G159510
Cyclotella cryptica
9.5e-76
284.6
209
73.7
tho603300
Thalassiosira oceanica
2.6e-65
250.0
134
100.0
sya00G66650
Synedra acus
1.5e-52
207.6
201
57.7
sya00G66660
Synedra acus
1.5e-52
207.6
201
57.7
ptri180750
Phaeodactylum tricornutum
9.0e-50
198.4
202
54.0
Sro1247_g255840
Seminavis robusta
1.1e-47
191.4
202
53.0
ps00G01800
Pseudo-nitzschia multiseries
7.1e-47
188.7
207
53.1
fso116180
Fistulifera solaris
2.1e-46
187.2
201
51.2
fso25330
Fistulifera solaris
2.7e-46
186.8
201
51.2
gene14016
Fragilariopsis cylindrus
8.7e-45
181.8
214
50.5
ENSG00000241837
Homo sapiens
3.3e-28
126.7
180
38.9
SPCC1840.06
Schizosaccharomyces pombe
1.7e-24
114.4
196
36.7
FBgn0016691
Drosophila melanogaster
2.5e-23
110.5
199
32.2
WBGene00000230
Caenorhabditis elegans
4.2e-23
109.8
178
34.3
Pp3c21_13430
Physcomitrella patens
1.0e-21
105.1
197
32.0
Pp3c21_15430
Physcomitrella patens
1.3e-21
104.8
198
31.3
AT5G13450
Arabidopsis thaliana
2.8e-19
97.1
206
29.1
AA0011G01800
Aureococcus anophagefferens
1.1e-18
95.1
179
34.1
Pp3c11_16260
Physcomitrella patens
3.1e-18
93.6
178
32.6
pte150650
Paramecium tetraurelia
5.9e-17
89.4
178
33.1
ENSG00000249209
Homo sapiens
3.8e-16
86.7
148
38.5
YDR298C
Saccharomyces cerevisiae strain S288C
3.8e-16
86.7
192
28.1
pte347800
Paramecium tetraurelia
5.0e-16
86.3
180
33.3
pte391730
Paramecium tetraurelia
8.5e-16
85.5
192
31.8
emh315740
Emiliania huxleyi
6.1e-14
79.3
180
28.3
pte120150
Paramecium tetraurelia
6.1e-14
79.3
192
30.2
CM05G01980
Cyanidioschyzon merolae
7.9e-14
79.0
201
28.9
CM07G00040
Cyanidioschyzon merolae
7.9e-14
79.0
201
28.9
sya00G268780
Synedra acus
3.9e-13
76.6
171
28.1
Cre16.g680000
Chlamydomonas reinhardtii
8.8e-13
75.5
193
29.0
sya00G10830
Synedra acus
1.1e-12
75.1
171
29.8
ccr147380
Chondrus crispus
9.7e-12
72.0
170
25.9
gsu_chlor00G01060
Galdieria sulphuraria
6.9e-10
65.9
170
27.1
AACG00310
Aureococcus anophagefferens
1.7e-08
61.2
166
26.5
Naga_100066g9
Nannochloropsis gaditana
4.2e-07
56.6
203
25.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (4 genes)
Seminavis robusta (1 genes)
Synedra acus (4 genes)
Physcomitrella patens (3 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing