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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
tho189900
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
tho189900
Thalassiosira oceanica
9.0e-196
684.1
347
100.0
ptri229170
Phaeodactylum tricornutum
7.0e-15
83.2
228
28.5
CC00G57010
Cyclotella cryptica
1.7e-13
78.6
150
32.0
tho196600
Thalassiosira oceanica
2.5e-12
74.7
242
28.1
tps71590
Thalassiosira pseudonana
7.3e-12
73.2
128
33.6
gene6749
Fragilariopsis cylindrus
4.7e-11
70.5
229
25.8
fso33230
Fistulifera solaris
6.2e-11
70.1
266
25.6
Sro245_g097390
Seminavis robusta
4.0e-10
67.4
252
26.2
tho20540
Thalassiosira oceanica
4.0e-10
67.4
238
24.8
ps00G155910
Pseudo-nitzschia multiseries
4.4e-09
63.9
196
27.6
tho194020
Thalassiosira oceanica
5.8e-09
63.5
130
32.3
Sro1228_g254370
Seminavis robusta
7.5e-09
63.2
185
25.9
tps150290
Thalassiosira pseudonana
7.5e-09
63.2
86
38.4
fso15630
Fistulifera solaris
1.7e-08
62.0
198
26.3
Sro1512_g278790
Seminavis robusta
2.2e-08
61.6
198
26.3
tps38520
Thalassiosira pseudonana
2.2e-08
61.6
182
25.3
tho314880
Thalassiosira oceanica
2.9e-08
61.2
198
24.7
Sro776_g200900
Seminavis robusta
4.9e-08
60.5
137
32.1
CC00G196020
Cyclotella cryptica
6.4e-08
60.1
130
31.5
Sro506_g156280
Seminavis robusta
6.4e-08
60.1
243
24.3
CC00G125810
Cyclotella cryptica
2.4e-07
58.2
128
30.5
CC00G134640
Cyclotella cryptica
3.2e-07
57.8
213
24.4
gene16432
Fragilariopsis cylindrus
4.1e-07
57.4
196
24.0
tps170450
Thalassiosira pseudonana
4.1e-07
57.4
292
24.3
Sro1353_g265400
Seminavis robusta
5.4e-07
57.0
186
24.7
CC00G11110
Cyclotella cryptica
7.1e-07
56.6
212
25.5
tho592300
Thalassiosira oceanica
7.1e-07
56.6
182
30.8
ps00G135050
Pseudo-nitzschia multiseries
9.2e-07
56.2
189
24.3
ptri226930
Phaeodactylum tricornutum
1.2e-06
55.8
184
25.0
fso08560
Fistulifera solaris
1.6e-06
55.5
196
23.5
sya00G43360
Synedra acus
2.1e-06
55.1
81
38.3
fso143640
Fistulifera solaris
2.7e-06
54.7
98
31.6
ptri228830
Phaeodactylum tricornutum
2.7e-06
54.7
196
22.4
tho132960
Thalassiosira oceanica
4.6e-06
53.9
126
26.2
Sro560_g166640
Seminavis robusta
6.0e-06
53.5
85
32.9
AA0012G01350
Aureococcus anophagefferens
7.8e-06
53.1
134
30.6
gene10828
Fragilariopsis cylindrus
7.8e-06
53.1
79
31.6
Sro299_g111470
Seminavis robusta
7.8e-06
53.1
84
29.8
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (7 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (5 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (8 genes)
Synedra acus (1 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing