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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
tho138920
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
tho138920
Thalassiosira oceanica
1.1e-201
703.7
357
100.0
tho396280
Thalassiosira oceanica
3.0e-170
599.4
318
96.5
CC00G203890
Cyclotella cryptica
6.7e-45
183.0
375
33.9
tps107880
Thalassiosira pseudonana
3.3e-44
180.6
380
34.5
Ec-14_004520
Ectocarpus siliculosus
1.8e-21
105.1
292
29.8
sya00G172320
Synedra acus
8.8e-21
102.8
246
30.1
Sro104_g053040
Seminavis robusta
1.2e-20
102.4
311
30.5
sya00G19240
Synedra acus
2.4e-18
94.7
242
30.2
PSNMU-V1.4_AUG-EV-PASAV3_0116140
Pseudo-nitzschia multistriata
3.8e-16
87.4
228
34.2
ptri70810
Phaeodactylum tricornutum
1.5e-15
85.5
197
31.5
fso131540
Fistulifera solaris
1.0e-13
79.3
283
26.9
sya00G211860
Synedra acus
2.4e-10
68.2
186
29.6
tps164920
Thalassiosira pseudonana
1.2e-09
65.9
229
27.1
fso10620
Fistulifera solaris
2.7e-09
64.7
171
29.2
fso111720
Fistulifera solaris
1.0e-08
62.8
190
32.1
fso176330
Fistulifera solaris
3.9e-08
60.8
189
30.2
CC00G191390
Cyclotella cryptica
1.1e-07
59.3
195
27.7
emh504730
Emiliania huxleyi
2.8e-06
54.7
175
30.3
emh57380
Emiliania huxleyi
2.8e-06
54.7
175
30.3
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (3 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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