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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
sya00G67070
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
sya00G67070
Synedra acus
1.7e-216
753.1
380
100.0
sya00G48140
Synedra acus
7.3e-74
279.3
141
95.7
sya00G00330
Synedra acus
9.0e-72
272.3
141
92.9
Sro1369_g266930
Seminavis robusta
1.3e-33
145.6
319
35.1
gene14800
Fragilariopsis cylindrus
9.4e-29
129.4
226
41.2
ps00G29420
Pseudo-nitzschia multiseries
4.7e-28
127.1
285
36.1
tho22100
Thalassiosira oceanica
1.8e-27
125.2
307
32.9
fso31390
Fistulifera solaris
3.9e-27
124.0
298
34.9
PSNMU-V1.4_AUG-EV-PASAV3_0030360
Pseudo-nitzschia multistriata
2.0e-26
121.7
286
34.3
fso118670
Fistulifera solaris
2.2e-25
118.2
300
34.7
CC00G46510
Cyclotella cryptica
5.3e-24
113.6
281
32.7
Pp3c10_8190
Physcomitrella patens
2.5e-13
78.2
186
30.1
ENSG00000060642
Homo sapiens
2.2e-09
65.1
202
29.2
Ec-17_003500
Ectocarpus siliculosus
4.1e-08
60.8
107
41.1
AT1G11880
Arabidopsis thaliana
7.7e-07
56.6
176
28.4
WBGene00020375
Caenorhabditis elegans
8.6e-06
53.1
149
28.9
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (3 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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