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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
sya00G32010
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
sya00G32010
Synedra acus
0.0e+00
2174.4
1142
100.0
PSNMU-V1.4_AUG-EV-PASAV3_0081460
Pseudo-nitzschia multistriata
3.2e-290
999.6
1201
48.2
ps00G192280
Pseudo-nitzschia multiseries
6.7e-280
965.3
1175
50.0
ptri228950
Phaeodactylum tricornutum
6.7e-272
938.7
1184
46.1
fso33200
Fistulifera solaris
5.5e-258
892.5
1156
45.4
fso136470
Fistulifera solaris
2.3e-256
887.1
1157
45.2
Sro750_g197030
Seminavis robusta
2.1e-249
864.0
1179
44.4
gene16973
Fragilariopsis cylindrus
2.9e-227
790.4
786
55.1
tps04010
Thalassiosira pseudonana
1.2e-207
725.3
1354
38.1
CC00G99480
Cyclotella cryptica
8.7e-187
656.0
875
46.7
Ec-20_004140
Ectocarpus siliculosus
1.4e-48
196.8
882
25.5
tho344440
Thalassiosira oceanica
9.0e-43
177.6
284
39.4
ENSG00000160695
Homo sapiens
1.4e-30
137.1
599
24.9
ENSG00000280616
Homo sapiens
1.4e-30
137.1
599
24.9
AT2G05170
Arabidopsis thaliana
1.8e-30
136.7
746
23.3
Pp3c25_5560
Physcomitrella patens
8.2e-20
101.3
380
26.8
Cre02.g095074
Chlamydomonas reinhardtii
3.2e-16
89.4
138
37.7
WBGene00011067
Caenorhabditis elegans
3.1e-11
72.8
142
33.1
SPAC823.12
Schizosaccharomyces pombe
1.6e-10
70.5
378
24.1
emh625840
Emiliania huxleyi
1.1e-08
64.3
91
38.5
YMR231W
Saccharomyces cerevisiae strain S288C
3.2e-08
62.8
312
20.5
FBgn0052350
Drosophila melanogaster
1.6e-07
60.5
241
22.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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