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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
sya00G104680
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
sya00G104680
Synedra acus
0.0e+00
2500.7
1256
100.0
sya00G90480
Synedra acus
1.0e-143
513.1
1288
29.4
ptri63620
Phaeodactylum tricornutum
3.8e-119
431.4
1259
28.1
Sro1091_g240250
Seminavis robusta
7.5e-83
310.8
1446
24.1
CC00G121480
Cyclotella cryptica
9.8e-83
310.5
645
32.2
PSNMU-V1.4_AUG-EV-PASAV3_0011260
Pseudo-nitzschia multistriata
3.0e-79
298.9
669
31.8
tho36780
Thalassiosira oceanica
3.4e-75
285.4
643
31.3
fso20180
Fistulifera solaris
6.8e-60
234.6
1068
23.7
tps224570
Thalassiosira pseudonana
1.1e-57
227.3
298
41.6
gene20353
Fragilariopsis cylindrus
4.3e-54
215.3
295
40.7
ps00G11940
Pseudo-nitzschia multiseries
1.6e-53
213.4
323
38.4
ENSG00000078142
Homo sapiens
2.5e-25
119.8
299
27.8
FBgn0015277
Drosophila melanogaster
5.5e-25
118.6
333
27.0
emh212220
Emiliania huxleyi
2.8e-21
106.3
293
27.3
WBGene00006932
Caenorhabditis elegans
4.8e-21
105.5
310
27.4
CC00G210320
Cyclotella cryptica
4.8e-21
105.5
190
35.8
Pp3c10_8910
Physcomitrella patens
1.1e-20
104.4
299
24.7
YLR240W
Saccharomyces cerevisiae strain S288C
1.1e-20
104.4
299
28.1
Naga_100098g4
Nannochloropsis gaditana
4.1e-20
102.4
299
26.4
sya00G204940
Synedra acus
4.1e-20
102.4
295
26.8
pte352150
Paramecium tetraurelia
5.3e-20
102.1
304
27.6
SPAC458.05
Schizosaccharomyces pombe
9.0e-20
101.3
172
36.6
Cre01.g035500
Chlamydomonas reinhardtii
1.2e-19
100.9
298
26.5
ptri32140
Phaeodactylum tricornutum
2.0e-19
100.1
317
24.6
AT1G60490
Arabidopsis thaliana
4.5e-19
99.0
172
33.7
tps13120
Thalassiosira pseudonana
2.9e-18
96.3
190
33.2
fso168260
Fistulifera solaris
3.8e-18
95.9
194
32.5
PSNMU-V1.4_AUG-EV-PASAV3_0115840
Pseudo-nitzschia multistriata
4.2e-17
92.4
191
35.1
fso152160
Fistulifera solaris
5.5e-17
92.0
194
31.4
Sro1899_g304200
Seminavis robusta
7.2e-17
91.7
176
34.7
Ec-12_006380
Ectocarpus siliculosus
2.1e-16
90.1
299
25.4
Naga_100084g15
Nannochloropsis gaditana
2.1e-16
90.1
266
26.7
Ec-04_003810
Ectocarpus siliculosus
3.6e-16
89.4
300
23.0
gene2633
Fragilariopsis cylindrus
4.6e-16
89.0
192
31.8
WBGene00009552
Caenorhabditis elegans
1.1e-12
77.8
310
23.9
ENSG00000011405
Homo sapiens
1.1e-12
77.8
309
23.9
ENSG00000139144
Homo sapiens
1.5e-11
73.9
311
21.2
ENSG00000133056
Homo sapiens
5.9e-11
72.0
308
22.7
ps00G11950
Pseudo-nitzschia multiseries
7.7e-11
71.6
162
27.8
ps00G12450
Pseudo-nitzschia multiseries
7.7e-11
71.6
145
35.2
FBgn0015279
Drosophila melanogaster
1.3e-10
70.9
308
23.1
ENSG00000105851
Homo sapiens
1.3e-10
70.9
304
22.7
sya00G50310
Synedra acus
2.2e-10
70.1
303
22.8
Sro580_g170170
Seminavis robusta
8.5e-10
68.2
303
22.8
ENSG00000051382
Homo sapiens
1.4e-09
67.4
333
21.0
CC00G90030
Cyclotella cryptica
4.2e-09
65.9
295
22.4
FBgn0015278
Drosophila melanogaster
5.5e-09
65.5
311
23.2
pte02390
Paramecium tetraurelia
1.2e-08
64.3
346
19.7
pte71440
Paramecium tetraurelia
1.2e-08
64.3
189
21.7
FBgn0004373
Drosophila melanogaster
2.7e-08
63.2
151
27.8
tps154110
Thalassiosira pseudonana
2.7e-08
63.2
295
21.7
AA0004G00940
Aureococcus anophagefferens
1.0e-07
61.2
124
29.8
pte544140
Paramecium tetraurelia
1.0e-07
61.2
316
19.6
ENSG00000121879
Homo sapiens
1.4e-07
60.8
306
19.6
CC00G55570
Cyclotella cryptica
1.8e-07
60.5
297
21.9
CC00G128770
Cyclotella cryptica
1.8e-07
60.5
297
21.9
gene20352
Fragilariopsis cylindrus
3.0e-07
59.7
147
27.9
pte399970
Paramecium tetraurelia
3.0e-07
59.7
301
21.3
tps57290
Thalassiosira pseudonana
3.0e-07
59.7
297
22.6
fso147290
Fistulifera solaris
5.2e-07
58.9
304
21.4
pte424800
Paramecium tetraurelia
5.2e-07
58.9
304
19.7
ps00G46300
Pseudo-nitzschia multiseries
6.7e-07
58.5
197
24.4
ptri41050
Phaeodactylum tricornutum
1.1e-06
57.8
304
21.4
SPBC577.06c
Schizosaccharomyces pombe
1.5e-06
57.4
190
26.3
YNL267W
Saccharomyces cerevisiae strain S288C
2.0e-06
57.0
301
24.9
Pp3c5_11330
Physcomitrella patens
3.3e-06
56.2
179
27.9
Sro87_g045940
Seminavis robusta
3.3e-06
56.2
153
28.1
WBGene00000090
Caenorhabditis elegans
7.4e-06
55.1
210
25.2
pte630790
Paramecium tetraurelia
9.7e-06
54.7
324
22.5
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (4 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (5 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (7 genes)
Drosophila melanogaster (4 genes)
Caenorhabditis elegans (3 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (7 genes)
Seminavis robusta (4 genes)
Synedra acus (4 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing