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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
sya00G08940
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
sya00G08940
Synedra acus
0.0e+00
1096.3
558
100.0
Sro1515_g279010
Seminavis robusta
8.1e-154
545.4
531
53.7
fso93520
Fistulifera solaris
3.8e-143
510.0
559
49.7
fso158870
Fistulifera solaris
1.5e-139
498.0
529
51.4
PSNMU-V1.4_AUG-EV-PASAV3_0041320
Pseudo-nitzschia multistriata
1.9e-126
454.5
558
45.9
tho242420
Thalassiosira oceanica
5.1e-116
419.9
562
43.8
ps00G80310
Pseudo-nitzschia multiseries
2.1e-93
344.7
437
45.3
gene15027
Fragilariopsis cylindrus
1.4e-92
342.0
436
45.0
AT1G11670
Arabidopsis thaliana
4.3e-38
161.0
530
25.8
Pp3c17_22040
Physcomitrella patens
6.2e-37
157.1
529
27.8
AT1G15170
Arabidopsis thaliana
1.5e-35
152.5
529
25.9
Pp3c2_12080
Physcomitrella patens
2.6e-35
151.8
530
25.7
AT1G61890
Arabidopsis thaliana
5.8e-35
150.6
530
25.3
AT1G15150
Arabidopsis thaliana
1.3e-34
149.4
529
25.7
Pp3c4_16610
Physcomitrella patens
1.3e-34
149.4
534
25.8
AT1G15180
Arabidopsis thaliana
1.7e-34
149.1
550
26.7
Pp3c10_15660
Physcomitrella patens
2.9e-34
148.3
543
26.0
Pp3c14_17840
Physcomitrella patens
8.3e-34
146.7
555
26.8
AT2G04080
Arabidopsis thaliana
4.1e-33
144.4
528
29.0
AT5G52450
Arabidopsis thaliana
7.1e-33
143.7
528
25.8
AT1G71140
Arabidopsis thaliana
2.1e-32
142.1
396
29.8
AT1G15160
Arabidopsis thaliana
1.7e-31
139.0
529
26.1
AT5G49130
Arabidopsis thaliana
3.0e-31
138.3
554
25.3
AT3G21690
Arabidopsis thaliana
8.6e-31
136.7
530
24.7
Sro15_g011090
Seminavis robusta
1.5e-30
136.0
535
25.0
AT2G34360
Arabidopsis thaliana
1.6e-29
132.5
536
25.2
AT1G64820
Arabidopsis thaliana
3.6e-29
131.3
537
25.5
AT2G04050
Arabidopsis thaliana
3.6e-29
131.3
526
27.6
AT4G21910
Arabidopsis thaliana
4.0e-28
127.9
525
24.8
CC00G60790
Cyclotella cryptica
6.8e-28
127.1
575
23.7
AT2G04100
Arabidopsis thaliana
1.2e-27
126.3
527
24.1
AT1G66780
Arabidopsis thaliana
3.4e-27
124.8
506
26.3
AT2G04040
Arabidopsis thaliana
5.8e-27
124.0
528
26.1
SPCC4B3.13
Schizosaccharomyces pombe
1.3e-26
122.9
476
25.2
Cre01.g014150
Chlamydomonas reinhardtii
1.1e-25
119.8
511
23.7
AT1G66760
Arabidopsis thaliana
1.4e-25
119.4
398
25.9
AT2G04070
Arabidopsis thaliana
1.4e-25
119.4
542
25.1
tps50240
Thalassiosira pseudonana
2.4e-25
118.6
531
24.3
ENSG00000180638
Homo sapiens
9.2e-25
116.7
467
28.5
Cre10.g444900
Chlamydomonas reinhardtii
1.2e-24
116.3
407
28.0
AT5G65380
Arabidopsis thaliana
2.1e-24
115.5
523
24.7
ENSG00000142494
Homo sapiens
2.1e-24
115.5
534
25.1
SPAC323.07c
Schizosaccharomyces pombe
3.9e-23
111.3
412
25.2
AT2G04090
Arabidopsis thaliana
5.1e-23
110.9
395
25.8
Cre01.g027764
Chlamydomonas reinhardtii
6.6e-23
110.5
480
23.8
tho486100
Thalassiosira oceanica
1.9e-22
109.0
235
31.1
AT1G71870
Arabidopsis thaliana
2.5e-22
108.6
541
23.8
AT5G19700
Arabidopsis thaliana
5.6e-22
107.5
533
22.5
Pp3c5_21630
Physcomitrella patens
5.6e-22
107.5
537
23.1
tps31150
Thalassiosira pseudonana
5.6e-22
107.5
369
24.1
AT3G23550
Arabidopsis thaliana
7.3e-22
107.1
380
24.5
Pp3c10_17490
Physcomitrella patens
7.3e-22
107.1
540
24.6
AA0058G00220
Aureococcus anophagefferens
1.2e-21
106.3
397
26.7
AT3G23560
Arabidopsis thaliana
2.8e-21
105.1
380
24.2
AT4G29140
Arabidopsis thaliana
1.1e-20
103.2
551
23.2
Pp3c10_10570
Physcomitrella patens
1.8e-20
102.4
535
22.8
AT1G58340
Arabidopsis thaliana
2.4e-20
102.1
540
21.7
AT4G00350
Arabidopsis thaliana
2.0e-19
99.0
503
23.3
tho111840
Thalassiosira oceanica
2.0e-19
99.0
524
23.3
Cre03.g205850
Chlamydomonas reinhardtii
9.9e-19
96.7
232
29.3
Pp3c6_11630
Physcomitrella patens
1.7e-18
95.9
526
22.1
Pp3c1_37630
Physcomitrella patens
4.9e-18
94.4
384
24.7
tho116900
Thalassiosira oceanica
6.4e-18
94.0
551
24.7
AT3G59030
Arabidopsis thaliana
1.1e-17
93.2
405
24.9
Cre12.g523250
Chlamydomonas reinhardtii
1.1e-17
93.2
524
23.3
CC00G114010
Cyclotella cryptica
1.1e-17
93.2
528
23.5
AT3G26590
Arabidopsis thaliana
1.9e-17
92.4
518
22.0
Pp3c14_23000
Physcomitrella patens
1.9e-17
92.4
399
23.6
Cre12.g499700
Chlamydomonas reinhardtii
2.4e-17
92.0
390
25.9
Cre01.g051211
Chlamydomonas reinhardtii
5.4e-17
90.9
471
24.6
AT4G23030
Arabidopsis thaliana
7.1e-17
90.5
389
23.4
Cre10.g445850
Chlamydomonas reinhardtii
7.1e-17
90.5
566
23.5
Ec-23_000920
Ectocarpus siliculosus
1.2e-16
89.7
400
24.0
Naga_100053g11
Nannochloropsis gaditana
1.2e-16
89.7
489
24.3
Cre14.g610750
Chlamydomonas reinhardtii
1.6e-16
89.4
530
24.9
AT5G52050
Arabidopsis thaliana
3.5e-16
88.2
394
24.6
gsu135060
Galdieria sulphuraria
4.6e-16
87.8
409
24.2
AT1G33100
Arabidopsis thaliana
3.9e-15
84.7
372
25.8
tho01400
Thalassiosira oceanica
1.5e-14
82.8
200
27.5
ptri147330
Phaeodactylum tricornutum
3.6e-13
78.2
316
25.3
emh543580
Emiliania huxleyi
4.8e-13
77.8
502
25.9
fso14910
Fistulifera solaris
4.8e-13
77.8
342
24.3
emh446400
Emiliania huxleyi
2.4e-12
75.5
378
25.1
emh230720
Emiliania huxleyi
2.4e-12
75.5
378
25.1
Cre14.g625350
Chlamydomonas reinhardtii
4.0e-12
74.7
377
24.7
AT2G38510
Arabidopsis thaliana
9.0e-12
73.6
392
22.7
fso134100
Fistulifera solaris
1.5e-11
72.8
343
24.5
pte774970
Paramecium tetraurelia
3.4e-11
71.6
329
23.4
pte106630
Paramecium tetraurelia
5.8e-11
70.9
384
20.6
AT2G04066
Arabidopsis thaliana
7.6e-11
70.5
132
34.8
gene14863
Fragilariopsis cylindrus
9.9e-11
70.1
345
24.1
tho117820
Thalassiosira oceanica
9.9e-11
70.1
237
24.9
emh68340
Emiliania huxleyi
1.3e-10
69.7
293
24.2
pte313680
Paramecium tetraurelia
1.7e-10
69.3
412
23.3
emh703360
Emiliania huxleyi
2.9e-10
68.6
293
23.9
emh273130
Emiliania huxleyi
2.9e-10
68.6
293
24.2
Sro47_g027780
Seminavis robusta
6.4e-10
67.4
340
23.8
AA0006G00310
Aureococcus anophagefferens
2.4e-09
65.5
415
23.4
AT1G73700
Arabidopsis thaliana
4.2e-09
64.7
270
24.1
pte266370
Paramecium tetraurelia
7.1e-09
63.9
424
23.3
CC00G182610
Cyclotella cryptica
1.2e-08
63.2
198
27.3
pte334500
Paramecium tetraurelia
4.6e-08
61.2
447
23.0
AT4G21903
Arabidopsis thaliana
6.7e-07
57.4
244
23.0
sya00G152900
Synedra acus
1.1e-06
56.6
323
22.9
fso84030
Fistulifera solaris
1.5e-06
56.2
331
23.0
fso169670
Fistulifera solaris
1.5e-06
56.2
448
21.9
PSNMU-V1.4_AUG-EV-PASAV3_0124410
Pseudo-nitzschia multistriata
1.5e-06
56.2
399
22.8
Sro514_g158000
Seminavis robusta
1.9e-06
55.8
343
21.9
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (6 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (6 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (3 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (38 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (6 genes)
Paramecium tetraurelia (5 genes)
Seminavis robusta (4 genes)
Synedra acus (2 genes)
Physcomitrella patens (11 genes)
Chlamydomonas reinhardtii (10 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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