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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
ptri244570
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
ptri244570
Phaeodactylum tricornutum
1.5e-33
142.9
71
100.0
ptri89380
Phaeodactylum tricornutum
2.4e-26
119.0
70
85.7
ptri43050
Phaeodactylum tricornutum
5.3e-26
117.9
70
84.3
ptri61420
Phaeodactylum tricornutum
2.6e-25
115.5
70
85.7
ptri67400
Phaeodactylum tricornutum
2.6e-25
115.5
70
85.7
ptri48510
Phaeodactylum tricornutum
5.8e-25
114.4
70
84.3
ptri79920
Phaeodactylum tricornutum
5.8e-25
114.4
70
84.3
ptri85160
Phaeodactylum tricornutum
5.8e-25
114.4
70
84.3
ptri142450
Phaeodactylum tricornutum
5.8e-25
114.4
70
84.3
ptri153780
Phaeodactylum tricornutum
5.8e-25
114.4
70
84.3
ptri240440
Phaeodactylum tricornutum
5.8e-25
114.4
70
84.3
ptri06840
Phaeodactylum tricornutum
1.3e-24
113.2
70
84.3
ptri76360
Phaeodactylum tricornutum
2.2e-24
112.5
70
82.9
ptri85540
Phaeodactylum tricornutum
2.2e-24
112.5
70
82.9
ptri51910
Phaeodactylum tricornutum
2.9e-24
112.1
70
82.9
ptri93850
Phaeodactylum tricornutum
2.9e-24
112.1
70
82.9
ptri102180
Phaeodactylum tricornutum
1.1e-23
110.2
70
81.4
ptri158730
Phaeodactylum tricornutum
4.2e-23
108.2
70
81.4
ptri102080
Phaeodactylum tricornutum
2.3e-21
102.4
70
77.1
ptri48570
Phaeodactylum tricornutum
4.8e-19
94.7
70
74.3
ptri97250
Phaeodactylum tricornutum
4.8e-19
94.7
64
76.6
sya00G135000
Synedra acus
1.5e-17
89.7
70
64.3
ptri197270
Phaeodactylum tricornutum
3.4e-17
88.6
59
78.0
ptri03420
Phaeodactylum tricornutum
9.7e-12
70.5
69
56.5
ptri26670
Phaeodactylum tricornutum
9.7e-12
70.5
69
56.5
ptri102420
Phaeodactylum tricornutum
9.7e-12
70.5
69
56.5
ptri16340
Phaeodactylum tricornutum
1.3e-11
70.1
69
56.5
ptri81600
Phaeodactylum tricornutum
1.3e-11
70.1
69
56.5
ptri179890
Phaeodactylum tricornutum
1.3e-11
70.1
69
56.5
ptri26830
Phaeodactylum tricornutum
3.7e-11
68.6
69
55.1
ptri214330
Phaeodactylum tricornutum
3.7e-11
68.6
69
55.1
fso50240
Fistulifera solaris
4.8e-11
68.2
69
46.4
fso106470
Fistulifera solaris
4.8e-11
68.2
69
46.4
ptri232690
Phaeodactylum tricornutum
6.3e-11
67.8
69
55.1
fso67030
Fistulifera solaris
8.2e-11
67.4
68
48.5
CC00G58700
Cyclotella cryptica
1.2e-09
63.5
62
54.8
gene13423
Fragilariopsis cylindrus
1.5e-09
63.2
69
42.0
gene12535
Fragilariopsis cylindrus
1.5e-09
63.2
68
42.6
tho198720
Thalassiosira oceanica
3.4e-09
62.0
62
48.4
CC00G01680
Cyclotella cryptica
4.5e-09
61.6
62
46.8
CC00G150970
Cyclotella cryptica
5.9e-09
61.2
50
56.0
tho144280
Thalassiosira oceanica
1.3e-08
60.1
70
47.1
tho160640
Thalassiosira oceanica
1.3e-08
60.1
70
47.1
CC00G12570
Cyclotella cryptica
3.8e-08
58.5
72
45.8
tho421040
Thalassiosira oceanica
3.8e-08
58.5
70
45.7
CC00G65090
Cyclotella cryptica
5.0e-08
58.2
69
42.0
CC00G131730
Cyclotella cryptica
8.5e-08
57.4
63
49.2
CC00G174360
Cyclotella cryptica
8.5e-08
57.4
63
49.2
tho175820
Thalassiosira oceanica
1.1e-07
57.0
70
45.7
CC00G168590
Cyclotella cryptica
1.4e-07
56.6
73
43.8
tho48640
Thalassiosira oceanica
1.4e-07
56.6
71
43.7
tho66240
Thalassiosira oceanica
1.4e-07
56.6
69
44.9
tho87460
Thalassiosira oceanica
1.4e-07
56.6
70
45.7
tho132360
Thalassiosira oceanica
1.4e-07
56.6
71
43.7
CC00G79990
Cyclotella cryptica
2.5e-07
55.8
69
42.0
fso22030
Fistulifera solaris
3.2e-07
55.5
70
38.6
CC00G125540
Cyclotella cryptica
5.5e-07
54.7
69
43.5
CC00G135450
Cyclotella cryptica
5.5e-07
54.7
69
46.4
CC00G77330
Cyclotella cryptica
9.4e-07
53.9
49
53.1
CC00G108290
Cyclotella cryptica
9.4e-07
53.9
69
42.0
tho319880
Thalassiosira oceanica
1.2e-06
53.5
71
43.7
CC00G13990
Cyclotella cryptica
2.1e-06
52.8
69
43.5
CC00G90670
Cyclotella cryptica
2.1e-06
52.8
69
42.0
gene10720
Fragilariopsis cylindrus
2.1e-06
52.8
68
39.7
CC00G144060
Cyclotella cryptica
3.6e-06
52.0
70
41.4
gene4700
Fragilariopsis cylindrus
4.6e-06
51.6
68
39.7
CC00G52490
Cyclotella cryptica
6.1e-06
51.2
69
43.5
CC00G85000
Cyclotella cryptica
6.1e-06
51.2
68
44.1
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (31 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (10 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (4 genes)
Cyclotella cryptica (18 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (0 genes)
Synedra acus (1 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing