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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
ptri180750
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
ptri180750
Phaeodactylum tricornutum
4.2e-114
412.1
221
100.0
fso25330
Fistulifera solaris
5.4e-61
235.7
186
69.9
fso116180
Fistulifera solaris
5.4e-61
235.7
186
69.9
tho290880
Thalassiosira oceanica
3.9e-51
203.0
202
54.0
Sro1247_g255840
Seminavis robusta
8.7e-51
201.8
204
54.4
sya00G66650
Synedra acus
2.5e-50
200.3
208
53.4
sya00G66660
Synedra acus
2.5e-50
200.3
208
53.4
ps00G01800
Pseudo-nitzschia multiseries
8.1e-49
195.3
191
57.1
tps208450
Thalassiosira pseudonana
6.9e-48
192.2
181
56.9
CC00G159510
Cyclotella cryptica
9.0e-48
191.8
182
55.5
gene14016
Fragilariopsis cylindrus
8.4e-46
185.3
210
52.9
tho603300
Thalassiosira oceanica
1.6e-28
127.9
132
51.5
ENSG00000241837
Homo sapiens
1.0e-27
125.2
195
38.5
Pp3c21_15430
Physcomitrella patens
2.1e-25
117.5
177
35.0
Pp3c21_13430
Physcomitrella patens
1.4e-24
114.8
177
34.5
Pp3c11_16260
Physcomitrella patens
1.0e-22
108.6
179
34.6
FBgn0016691
Drosophila melanogaster
3.8e-22
106.7
190
31.6
SPCC1840.06
Schizosaccharomyces pombe
1.1e-21
105.1
181
37.0
WBGene00000230
Caenorhabditis elegans
2.3e-19
97.4
177
32.2
emh315740
Emiliania huxleyi
3.0e-19
97.1
194
32.5
AT5G13450
Arabidopsis thaliana
3.7e-17
90.1
175
30.3
AA0011G01800
Aureococcus anophagefferens
3.1e-16
87.0
178
33.1
ccr147380
Chondrus crispus
3.1e-16
87.0
171
32.2
sya00G10830
Synedra acus
1.5e-15
84.7
171
32.7
pte150650
Paramecium tetraurelia
2.6e-15
84.0
189
30.7
sya00G268780
Synedra acus
2.2e-14
80.9
179
30.2
YDR298C
Saccharomyces cerevisiae strain S288C
6.5e-14
79.3
186
28.5
pte347800
Paramecium tetraurelia
8.5e-14
79.0
189
29.6
pte391730
Paramecium tetraurelia
1.1e-13
78.6
189
29.6
pte120150
Paramecium tetraurelia
1.2e-12
75.1
189
29.6
ENSG00000249209
Homo sapiens
2.1e-12
74.3
135
37.0
CM05G01980
Cyanidioschyzon merolae
6.7e-11
69.3
197
27.4
CM07G00040
Cyanidioschyzon merolae
6.7e-11
69.3
197
27.4
syaC00790
Synedra acus
3.4e-07
57.0
169
26.0
Naga_100066g9
Nannochloropsis gaditana
1.3e-06
55.1
192
25.5
gsu28270
Galdieria sulphuraria
2.2e-06
54.3
161
22.4
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (4 genes)
Seminavis robusta (1 genes)
Synedra acus (5 genes)
Physcomitrella patens (3 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing