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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
ptri00340
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
ptri00340
Phaeodactylum tricornutum
0.0e+00
1091.6
558
100.0
fso201400
Fistulifera solaris
4.4e-51
204.1
473
35.3
fso03600
Fistulifera solaris
1.9e-49
198.7
454
35.5
Sro25_g016780
Seminavis robusta
2.1e-45
185.3
400
34.2
gene17617
Fragilariopsis cylindrus
1.6e-40
169.1
296
34.8
sya00G05890
Synedra acus
1.8e-36
155.6
450
29.8
ps00G139740
Pseudo-nitzschia multiseries
2.6e-35
151.8
328
31.7
tps01700
Thalassiosira pseudonana
4.6e-32
141.0
284
34.2
PSNMU-V1.4_AUG-EV-PASAV3_0066450
Pseudo-nitzschia multistriata
1.0e-31
139.8
364
29.9
CC00G145970
Cyclotella cryptica
1.1e-28
129.8
284
33.5
AT1G15570
Arabidopsis thaliana
1.6e-21
105.9
278
29.5
Cre03.g207900
Chlamydomonas reinhardtii
3.1e-20
101.7
277
31.4
Pp3c1_39120
Physcomitrella patens
6.9e-20
100.5
274
31.4
Pp3c1_39040
Physcomitrella patens
6.9e-20
100.5
274
31.4
AT5G25380
Arabidopsis thaliana
9.0e-20
100.1
271
29.2
Pp3c2_9020
Physcomitrella patens
1.2e-19
99.8
294
29.9
Pp3c2_8700
Physcomitrella patens
3.4e-19
98.2
275
29.8
Pp3c2_8780
Physcomitrella patens
3.4e-19
98.2
275
29.8
Pp3c2_8770
Physcomitrella patens
4.4e-19
97.8
308
29.5
Pp3c17_22710
Physcomitrella patens
1.3e-18
96.3
270
28.1
AT5G11300
Arabidopsis thaliana
2.9e-18
95.1
268
29.9
Naga_100051g13
Nannochloropsis gaditana
2.9e-18
95.1
343
26.2
tho07220
Thalassiosira oceanica
3.8e-18
94.7
294
30.3
AT5G06150
Arabidopsis thaliana
8.4e-18
93.6
268
28.0
Pp3c1_39100
Physcomitrella patens
8.4e-18
93.6
273
31.1
Pp3c14_23640
Physcomitrella patens
1.4e-17
92.8
271
29.5
AT1G80370
Arabidopsis thaliana
2.4e-17
92.0
269
27.5
AT1G77390
Arabidopsis thaliana
4.2e-17
91.3
274
28.8
Pp3c1_38770
Physcomitrella patens
4.2e-17
91.3
269
29.4
AT1G16330
Arabidopsis thaliana
9.3e-17
90.1
285
28.1
AT3G11520
Arabidopsis thaliana
1.6e-16
89.4
268
28.0
AT2G26760
Arabidopsis thaliana
2.1e-16
89.0
268
26.1
ENSG00000157456
Homo sapiens
2.1e-16
89.0
269
26.0
Sro331_g119100
Seminavis robusta
1.0e-15
86.7
249
29.3
emh525840
Emiliania huxleyi
1.7e-15
85.9
288
28.8
Ec-01_000740
Ectocarpus siliculosus
2.3e-15
85.5
282
27.3
AA0002G00300
Aureococcus anophagefferens
3.0e-15
85.1
242
27.7
AT5G43080
Arabidopsis thaliana
3.0e-15
85.1
250
29.6
ENSG00000133101
Homo sapiens
3.0e-15
85.1
279
28.3
AT1G44110
Arabidopsis thaliana
3.9e-15
84.7
277
25.6
AT1G47210
Arabidopsis thaliana
3.9e-15
84.7
279
29.4
CM09G02030
Cyanidioschyzon merolae
5.1e-15
84.3
207
31.4
FBgn0000405
Drosophila melanogaster
5.1e-15
84.3
273
24.9
ENSG00000134057
Homo sapiens
6.6e-15
84.0
239
26.4
AT4G37490
Arabidopsis thaliana
1.1e-14
83.2
262
26.3
Ec-01_009390
Ectocarpus siliculosus
3.3e-14
81.6
242
28.1
tps132020
Thalassiosira pseudonana
7.3e-14
80.5
256
24.6
ccr45040
Chondrus crispus
9.6e-14
80.1
252
27.8
sya00G61550
Synedra acus
1.3e-13
79.7
268
27.2
CC00G129960
Cyclotella cryptica
2.8e-13
78.6
268
28.4
PSNMU-V1.4_AUG-EV-PASAV3_0100250
Pseudo-nitzschia multistriata
3.6e-13
78.2
259
26.6
tho478780
Thalassiosira oceanica
3.6e-13
78.2
259
26.6
CC00G129930
Cyclotella cryptica
8.1e-13
77.0
250
26.8
Sro103_g052500
Seminavis robusta
8.1e-13
77.0
249
28.1
gene16392
Fragilariopsis cylindrus
1.4e-12
76.3
268
27.6
ps00G191600
Pseudo-nitzschia multiseries
1.4e-12
76.3
268
27.6
ptri126240
Phaeodactylum tricornutum
1.4e-12
76.3
277
26.7
sya00G154950
Synedra acus
1.4e-12
76.3
272
27.2
AT1G47230
Arabidopsis thaliana
1.8e-12
75.9
287
27.9
emh405720
Emiliania huxleyi
1.8e-12
75.9
281
27.4
Pp3c9_18910
Physcomitrella patens
1.8e-12
75.9
288
25.7
tps132060
Thalassiosira pseudonana
2.4e-12
75.5
268
27.2
fso112410
Fistulifera solaris
4.0e-12
74.7
268
27.2
fso176970
Fistulifera solaris
4.0e-12
74.7
268
27.2
gsu98950
Galdieria sulphuraria
4.0e-12
74.7
278
25.2
Pp3c15_21520
Physcomitrella patens
5.3e-12
74.3
286
26.2
pte688730
Paramecium tetraurelia
6.9e-12
73.9
214
29.4
PSNMU-V1.4_AUG-EV-PASAV3_0122920
Pseudo-nitzschia multistriata
9.0e-12
73.6
268
26.5
ps00G108070
Pseudo-nitzschia multiseries
1.2e-11
73.2
249
26.9
ENSG00000145386
Homo sapiens
1.5e-11
72.8
274
25.9
AT1G47220
Arabidopsis thaliana
3.4e-11
71.6
275
27.3
Sro781_g201590
Seminavis robusta
3.4e-11
71.6
253
28.9
Naga_100054g27
Nannochloropsis gaditana
4.5e-11
71.2
245
28.6
ENSG00000147082
Homo sapiens
5.8e-11
70.9
270
23.7
tho120800
Thalassiosira oceanica
7.6e-11
70.5
274
26.3
AT1G76310
Arabidopsis thaliana
9.9e-11
70.1
258
25.2
Cre10.g466200
Chlamydomonas reinhardtii
9.9e-11
70.1
206
29.6
FBgn0015625
Drosophila melanogaster
9.9e-11
70.1
277
24.9
gene12906
Fragilariopsis cylindrus
1.7e-10
69.3
274
24.5
fso18850
Fistulifera solaris
1.7e-10
69.3
297
24.6
Sro70_g038790
Seminavis robusta
2.2e-10
68.9
268
26.5
AT2G17620
Arabidopsis thaliana
2.9e-10
68.6
258
25.2
pte252790
Paramecium tetraurelia
2.9e-10
68.6
209
28.2
AT1G20610
Arabidopsis thaliana
3.8e-10
68.2
244
24.2
AA0031G00790
Aureococcus anophagefferens
4.9e-10
67.8
245
26.1
FBgn0000404
Drosophila melanogaster
4.9e-10
67.8
286
25.5
AT4G35620
Arabidopsis thaliana
8.4e-10
67.0
301
25.2
fso177160
Fistulifera solaris
8.4e-10
67.0
285
25.3
pte180580
Paramecium tetraurelia
8.4e-10
67.0
214
25.7
pte216190
Paramecium tetraurelia
8.4e-10
67.0
214
26.2
gsu90820
Galdieria sulphuraria
1.4e-09
66.2
214
28.0
pte692510
Paramecium tetraurelia
1.4e-09
66.2
209
25.4
WBGene00000868
Caenorhabditis elegans
1.9e-09
65.9
251
24.7
SPBC582.03
Schizosaccharomyces pombe
4.2e-09
64.7
294
25.2
pte118950
Paramecium tetraurelia
5.4e-09
64.3
207
23.7
SPAPB2B4.03
Schizosaccharomyces pombe
9.3e-09
63.5
272
24.3
CM09G02270
Cyanidioschyzon merolae
1.6e-08
62.8
263
24.0
pte52610
Paramecium tetraurelia
1.6e-08
62.8
207
23.7
YGR109C
Saccharomyces cerevisiae strain S288C
1.6e-08
62.8
233
23.6
ps00G117540
Pseudo-nitzschia multiseries
2.1e-08
62.4
207
24.6
CC00G26970
Cyclotella cryptica
2.7e-08
62.0
250
24.4
tho159540
Thalassiosira oceanica
2.7e-08
62.0
290
25.9
tps137160
Thalassiosira pseudonana
2.7e-08
62.0
162
26.5
pte443710
Paramecium tetraurelia
3.5e-08
61.6
208
27.9
pte517220
Paramecium tetraurelia
3.5e-08
61.6
207
22.7
AT1G20590
Arabidopsis thaliana
6.0e-08
60.8
157
28.0
WBGene00000865
Caenorhabditis elegans
6.0e-08
60.8
249
24.9
pte429170
Paramecium tetraurelia
1.0e-07
60.1
207
22.2
pte613940
Paramecium tetraurelia
1.0e-07
60.1
209
24.9
pte520750
Paramecium tetraurelia
1.3e-07
59.7
207
24.6
pte352350
Paramecium tetraurelia
1.8e-07
59.3
207
25.6
WBGene00000866
Caenorhabditis elegans
3.0e-07
58.5
252
23.4
WBGene00000863
Caenorhabditis elegans
5.1e-07
57.8
273
20.9
pte436900
Paramecium tetraurelia
5.1e-07
57.8
207
23.7
YLR210W
Saccharomyces cerevisiae strain S288C
5.1e-07
57.8
152
30.9
sya00G111690
Synedra acus
5.1e-07
57.8
172
25.6
ENSG00000118971
Homo sapiens
6.7e-07
57.4
158
25.3
ENSG00000105219
Homo sapiens
6.7e-07
57.4
210
29.5
emh541250
Emiliania huxleyi
8.7e-07
57.0
241
25.3
emh404840
Emiliania huxleyi
8.7e-07
57.0
122
32.0
emh270130
Emiliania huxleyi
8.7e-07
57.0
122
32.0
emh130010
Emiliania huxleyi
8.7e-07
57.0
241
25.3
Ec-11_004920
Ectocarpus siliculosus
8.7e-07
57.0
209
27.3
PSNMU-V1.4_AUG-EV-PASAV3_0042380
Pseudo-nitzschia multistriata
1.1e-06
56.6
162
24.7
pte136570
Paramecium tetraurelia
1.1e-06
56.6
207
23.7
pte620060
Paramecium tetraurelia
1.1e-06
56.6
207
25.6
pte760840
Paramecium tetraurelia
1.5e-06
56.2
209
26.3
pte722140
Paramecium tetraurelia
1.9e-06
55.8
207
24.2
Sro1125_g243970
Seminavis robusta
1.9e-06
55.8
242
24.8
pte788140
Paramecium tetraurelia
3.3e-06
55.1
242
23.1
YGR108W
Saccharomyces cerevisiae strain S288C
3.3e-06
55.1
235
22.1
ptri131110
Phaeodactylum tricornutum
4.3e-06
54.7
207
25.1
WBGene00000867
Caenorhabditis elegans
5.6e-06
54.3
252
23.4
WBGene00000871
Caenorhabditis elegans
9.6e-06
53.5
157
24.2
Sro251_g099220
Seminavis robusta
9.6e-06
53.5
292
24.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (4 genes)
Pseudo-nitzschia multiseries (4 genes)
Fistulifera solaris (6 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (3 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (7 genes)
Drosophila melanogaster (3 genes)
Caenorhabditis elegans (6 genes)
Saccharomyces cerevisiae strain S288C (3 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (20 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (6 genes)
Paramecium tetraurelia (19 genes)
Seminavis robusta (7 genes)
Synedra acus (4 genes)
Physcomitrella patens (12 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (4 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing