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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
pte727590
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
pte727590
Paramecium tetraurelia
0.0e+00
2736.4
1395
100.0
YGR098C
Saccharomyces cerevisiae strain S288C
3.0e-24
116.3
246
29.7
SPCC5E4.04
Schizosaccharomyces pombe
2.8e-22
109.8
242
27.7
ENSG00000135476
Homo sapiens
2.2e-19
100.1
240
28.8
sya00G250390
Synedra acus
6.5e-19
98.6
247
25.9
gene1703
Fragilariopsis cylindrus
2.1e-17
93.6
266
28.2
AT4G22970
Arabidopsis thaliana
1.0e-16
91.3
193
30.6
PSNMU-V1.4_AUG-EV-PASAV3_0104990
Pseudo-nitzschia multistriata
5.2e-16
89.0
275
26.2
Sro289_g109220
Seminavis robusta
5.2e-16
89.0
209
26.8
CC00G101230
Cyclotella cryptica
1.5e-15
87.4
260
25.4
ptri65980
Phaeodactylum tricornutum
9.7e-15
84.7
295
26.4
WBGene00004775
Caenorhabditis elegans
1.3e-14
84.3
191
26.2
emh532340
Emiliania huxleyi
1.3e-14
84.3
224
25.9
Cre01.g029200
Chlamydomonas reinhardtii
2.8e-14
83.2
200
28.5
ccr167560
Chondrus crispus
1.4e-13
80.9
239
27.2
Pp3c8_2900
Physcomitrella patens
1.4e-13
80.9
147
30.6
tps46450
Thalassiosira pseudonana
5.3e-13
79.0
243
25.5
ps00G180250
Pseudo-nitzschia multiseries
2.2e-11
73.6
241
26.1
WBGene00022741
Caenorhabditis elegans
8.5e-11
71.6
134
27.6
AA0051G00160
Aureococcus anophagefferens
3.6e-09
66.2
131
29.0
Naga_100006g40
Nannochloropsis gaditana
5.2e-08
62.4
141
27.7
FBgn0035627
Drosophila melanogaster
8.8e-08
61.6
204
26.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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