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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
pte541530
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
pte541530
Paramecium tetraurelia
0.0e+00
1156.0
607
100.0
pte463020
Paramecium tetraurelia
0.0e+00
1104.7
544
96.0
Cre13.g572850
Chlamydomonas reinhardtii
3.4e-113
410.6
449
43.9
ENSG00000146856
Homo sapiens
5.4e-111
403.3
432
42.4
ENSG00000165923
Homo sapiens
2.5e-108
394.4
428
45.3
Ec-11_006110
Ectocarpus siliculosus
2.8e-107
391.0
440
43.4
AA0024G00200
Aureococcus anophagefferens
2.3e-98
361.3
420
44.3
ENSG00000166748
Homo sapiens
7.1e-95
349.7
506
38.7
ENSG00000135049
Homo sapiens
2.7e-94
347.8
526
36.7
AA0020G01370
Aureococcus anophagefferens
1.5e-92
342.0
422
42.9
FBgn0265726
Drosophila melanogaster
4.4e-89
330.5
430
40.5
pte674870
Paramecium tetraurelia
3.9e-85
317.4
425
39.3
pte319890
Paramecium tetraurelia
6.6e-85
316.6
403
41.2
pte126800
Paramecium tetraurelia
9.6e-84
312.8
399
40.6
pte21210
Paramecium tetraurelia
5.2e-82
307.0
458
38.0
pte176250
Paramecium tetraurelia
6.9e-82
306.6
398
39.9
pte434210
Paramecium tetraurelia
9.0e-82
306.2
398
41.0
pte501940
Paramecium tetraurelia
2.0e-81
305.1
418
39.0
Ec-01_007980
Ectocarpus siliculosus
1.2e-78
295.8
551
32.8
AA0016G01560
Aureococcus anophagefferens
2.7e-78
294.7
456
37.3
WBGene00018995
Caenorhabditis elegans
1.6e-70
268.9
457
35.9
pte577730
Paramecium tetraurelia
8.7e-69
263.1
420
35.2
pte228760
Paramecium tetraurelia
1.3e-67
259.2
359
39.0
ENSG00000186094
Homo sapiens
1.2e-62
242.7
419
35.8
pte785460
Paramecium tetraurelia
6.0e-62
240.4
418
36.6
pte622160
Paramecium tetraurelia
2.1e-59
231.9
430
34.4
pte267230
Paramecium tetraurelia
1.1e-55
219.5
419
33.9
pte187620
Paramecium tetraurelia
1.9e-55
218.8
370
36.5
pte168410
Paramecium tetraurelia
7.1e-55
216.9
417
33.6
pte288460
Paramecium tetraurelia
1.3e-53
212.6
383
34.2
WBGene00017136
Caenorhabditis elegans
4.1e-50
201.1
423
32.6
pte512960
Paramecium tetraurelia
2.6e-49
198.4
394
29.9
pte181440
Paramecium tetraurelia
5.0e-48
194.1
423
32.4
pte15990
Paramecium tetraurelia
1.4e-47
192.6
409
33.5
FBgn0051019
Drosophila melanogaster
2.1e-46
188.7
435
29.7
pte449010
Paramecium tetraurelia
6.7e-45
183.7
429
31.7
pte436800
Paramecium tetraurelia
4.3e-44
181.0
429
31.2
pte413720
Paramecium tetraurelia
2.6e-41
171.8
413
30.5
pte754060
Paramecium tetraurelia
7.7e-41
170.2
404
30.7
pte218490
Paramecium tetraurelia
1.0e-40
169.9
363
31.7
pte282430
Paramecium tetraurelia
1.0e-40
169.9
409
32.0
pte779620
Paramecium tetraurelia
2.2e-40
168.7
292
37.3
pte408580
Paramecium tetraurelia
2.9e-40
168.3
385
31.7
pte650870
Paramecium tetraurelia
8.5e-40
166.8
425
30.1
pte465700
Paramecium tetraurelia
1.1e-39
166.4
425
29.4
pte707100
Paramecium tetraurelia
3.2e-39
164.9
402
30.1
pte722760
Paramecium tetraurelia
7.2e-39
163.7
307
35.5
Cre02.g102850
Chlamydomonas reinhardtii
8.8e-37
156.8
216
39.8
pte84580
Paramecium tetraurelia
8.8e-37
156.8
382
30.1
AA0005G05090
Aureococcus anophagefferens
2.0e-33
145.6
448
27.2
pte428270
Paramecium tetraurelia
2.0e-33
145.6
419
25.8
pte157800
Paramecium tetraurelia
1.0e-32
143.3
425
27.5
ENSG00000084693
Homo sapiens
1.3e-32
142.9
523
24.9
pte418310
Paramecium tetraurelia
1.4e-31
139.4
400
27.2
Ec-00_007300
Ectocarpus siliculosus
1.9e-31
139.0
155
47.1
pte81420
Paramecium tetraurelia
5.7e-28
127.5
426
26.1
Cre12.g528100
Chlamydomonas reinhardtii
3.1e-26
121.7
195
33.8
emh712530
Emiliania huxleyi
4.1e-26
121.3
194
33.5
Ec-14_002450
Ectocarpus siliculosus
5.3e-26
120.9
422
25.6
AA0001G04240
Aureococcus anophagefferens
2.0e-17
92.4
171
34.5
AA0001G01220
Aureococcus anophagefferens
6.5e-16
87.4
323
26.3
sya00G228240
Synedra acus
3.2e-15
85.1
203
28.6
pte224070
Paramecium tetraurelia
4.2e-15
84.7
363
22.9
Cre13.g565600
Chlamydomonas reinhardtii
3.4e-12
75.1
120
34.2
gene3451
Fragilariopsis cylindrus
4.4e-12
74.7
154
32.5
PSNMU-V1.4_AUG-EV-PASAV3_0062170
Pseudo-nitzschia multistriata
7.5e-12
73.9
144
34.0
gene7251
Fragilariopsis cylindrus
2.8e-11
72.0
145
33.8
ps00G57480
Pseudo-nitzschia multiseries
1.1e-10
70.1
152
30.3
tps73080
Thalassiosira pseudonana
1.4e-10
69.7
203
29.1
sya00G64440
Synedra acus
4.1e-10
68.2
211
27.0
sya00G172000
Synedra acus
9.1e-10
67.0
135
33.3
CC00G79370
Cyclotella cryptica
3.8e-08
61.6
217
25.8
ptri205380
Phaeodactylum tricornutum
2.1e-06
55.8
177
27.7
pte235080
Paramecium tetraurelia
3.6e-06
55.1
263
27.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (6 genes)
Ectocarpus siliculosus (4 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (6 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (39 genes)
Seminavis robusta (0 genes)
Synedra acus (3 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (4 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing