Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
pte502630
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
pte502630
Paramecium tetraurelia
1.8e-63
243.0
117
100.0
pte674260
Paramecium tetraurelia
1.8e-63
243.0
117
100.0
pte776990
Paramecium tetraurelia
1.8e-23
110.2
102
48.0
CM10G02140
Cyanidioschyzon merolae
2.6e-22
106.3
102
49.0
FBgn0000409
Drosophila melanogaster
5.8e-22
105.1
103
49.5
gsu25350
Galdieria sulphuraria
1.7e-21
103.6
101
50.5
FBgn0086907
Drosophila melanogaster
3.2e-20
99.4
102
47.1
ccr69620
Chondrus crispus
4.2e-20
99.0
103
44.7
Cre12.g522600
Chlamydomonas reinhardtii
5.5e-20
98.6
100
50.0
Pp3c7_26740
Physcomitrella patens
5.5e-20
98.6
100
48.0
Pp3c22_8430
Physcomitrella patens
3.5e-19
95.9
103
46.6
AT1G22840
Arabidopsis thaliana
1.0e-18
94.4
100
47.0
WBGene00017121
Caenorhabditis elegans
1.0e-18
94.4
102
44.1
ENSG00000172115
Homo sapiens
1.0e-18
94.4
98
45.9
Pp3c19_2800
Physcomitrella patens
1.0e-18
94.4
100
48.0
AT4G10040
Arabidopsis thaliana
1.3e-18
94.0
100
47.0
WBGene00013854
Caenorhabditis elegans
5.1e-18
92.0
114
42.1
CC00G173840
Cyclotella cryptica
8.7e-18
91.3
98
43.9
emh546390
Emiliania huxleyi
8.7e-18
91.3
99
42.4
emh157350
Emiliania huxleyi
8.7e-18
91.3
99
42.4
tps195820
Thalassiosira pseudonana
1.9e-17
90.1
98
43.9
emh74060
Emiliania huxleyi
2.5e-17
89.7
111
39.6
ptri106900
Phaeodactylum tricornutum
3.3e-17
89.4
94
45.7
SPCC191.07
Schizosaccharomyces pombe
3.3e-17
89.4
98
41.8
Sro565_g167560
Seminavis robusta
3.3e-17
89.4
98
43.9
emh634280
Emiliania huxleyi
4.3e-17
89.0
101
39.6
Pp3c22_18790
Physcomitrella patens
5.7e-17
88.6
100
43.0
fso95010
Fistulifera solaris
7.4e-17
88.2
94
45.7
fso80400
Fistulifera solaris
9.6e-17
87.8
94
45.7
sya00G78980
Synedra acus
1.3e-16
87.4
94
44.7
gene15472
Fragilariopsis cylindrus
3.7e-16
85.9
94
45.7
AA0004G05050
Aureococcus anophagefferens
6.3e-16
85.1
96
42.7
Ec-06_003800
Ectocarpus siliculosus
2.4e-15
83.2
93
45.2
ps00G95530
Pseudo-nitzschia multiseries
5.3e-15
82.0
98
40.8
PSNMU-V1.4_AUG-EV-PASAV3_0017530
Pseudo-nitzschia multistriata
9.0e-15
81.3
94
41.5
PSNMU-V1.4_AUG-EV-PASAV3_0067380
Pseudo-nitzschia multistriata
2.0e-14
80.1
94
40.4
YEL039C
Saccharomyces cerevisiae strain S288C
2.0e-14
80.1
98
38.8
emh424720
Emiliania huxleyi
2.6e-14
79.7
102
39.2
gene19699
Fragilariopsis cylindrus
3.4e-14
79.3
94
40.4
ps00G36460
Pseudo-nitzschia multiseries
7.6e-14
78.2
94
39.4
YJR048W
Saccharomyces cerevisiae strain S288C
1.0e-13
77.8
98
38.8
sya00G242980
Synedra acus
3.2e-12
72.8
100
38.0
emh20170
Emiliania huxleyi
1.6e-11
70.5
99
35.4
AA0013G02010
Aureococcus anophagefferens
2.1e-11
70.1
96
36.5
pte156360
Paramecium tetraurelia
1.8e-10
67.0
110
35.5
AA0034G00580
Aureococcus anophagefferens
2.5e-09
63.2
103
35.9
pte420030
Paramecium tetraurelia
4.3e-09
62.4
105
31.4
pte308200
Paramecium tetraurelia
1.6e-08
60.5
105
30.5
emh515580
Emiliania huxleyi
3.1e-07
56.2
104
33.7
pte755540
Paramecium tetraurelia
4.5e-06
52.4
116
31.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (3 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (7 genes)
Paramecium tetraurelia (7 genes)
Seminavis robusta (1 genes)
Synedra acus (2 genes)
Physcomitrella patens (4 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing