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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
pte437940
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
pte437940
Paramecium tetraurelia
6.1e-95
348.2
180
100.0
pte353290
Paramecium tetraurelia
9.4e-88
324.3
180
85.6
AT2G18650
Arabidopsis thaliana
1.2e-10
68.2
49
53.1
AT1G72220
Arabidopsis thaliana
3.5e-10
66.6
49
51.0
AT4G09130
Arabidopsis thaliana
3.5e-10
66.6
49
49.0
CC00G00250
Cyclotella cryptica
7.9e-10
65.5
82
39.0
AT5G07040
Arabidopsis thaliana
1.0e-09
65.1
54
48.1
pte51590
Paramecium tetraurelia
1.8e-09
64.3
63
41.3
tps186000
Thalassiosira pseudonana
1.8e-09
64.3
93
37.6
AT4G30400
Arabidopsis thaliana
3.9e-09
63.2
49
49.0
pte429710
Paramecium tetraurelia
3.9e-09
63.2
79
40.5
AT3G61550
Arabidopsis thaliana
5.1e-09
62.8
45
48.9
AT4G28890
Arabidopsis thaliana
5.1e-09
62.8
49
51.0
AT2G20030
Arabidopsis thaliana
8.7e-09
62.0
49
49.0
CC00G65830
Cyclotella cryptica
8.7e-09
62.0
76
38.2
Ec-27_007010
Ectocarpus siliculosus
8.7e-09
62.0
80
37.5
pte538730
Paramecium tetraurelia
8.7e-09
62.0
52
44.2
AT2G46160
Arabidopsis thaliana
1.1e-08
61.6
45
46.7
AT5G06490
Arabidopsis thaliana
1.1e-08
61.6
78
37.2
pte58080
Paramecium tetraurelia
1.1e-08
61.6
61
41.0
CC00G16200
Cyclotella cryptica
1.5e-08
61.2
82
36.6
Pp3c21_14400
Physcomitrella patens
1.5e-08
61.2
69
40.6
AT3G05200
Arabidopsis thaliana
1.9e-08
60.8
47
51.1
AT3G16720
Arabidopsis thaliana
1.9e-08
60.8
75
36.0
AT4G40070
Arabidopsis thaliana
1.9e-08
60.8
47
53.2
ps00G104930
Pseudo-nitzschia multiseries
2.5e-08
60.5
47
48.9
AT1G72310
Arabidopsis thaliana
3.3e-08
60.1
81
37.0
AT4G11680
Arabidopsis thaliana
3.3e-08
60.1
51
47.1
AT5G36001
Arabidopsis thaliana
3.3e-08
60.1
45
53.3
AT5G40250
Arabidopsis thaliana
3.3e-08
60.1
50
42.0
AT5G53110
Arabidopsis thaliana
3.3e-08
60.1
59
42.4
AT1G22500
Arabidopsis thaliana
4.3e-08
59.7
47
44.7
AT1G23980
Arabidopsis thaliana
4.3e-08
59.7
50
42.0
AT1G28040
Arabidopsis thaliana
4.3e-08
59.7
45
51.1
AT4G17905
Arabidopsis thaliana
4.3e-08
59.7
47
48.9
AT5G17600
Arabidopsis thaliana
4.3e-08
59.7
44
52.3
pte623100
Paramecium tetraurelia
4.3e-08
59.7
78
29.5
AT2G17450
Arabidopsis thaliana
5.7e-08
59.3
84
35.7
AT3G18930
Arabidopsis thaliana
5.7e-08
59.3
47
48.9
AT5G05810
Arabidopsis thaliana
5.7e-08
59.3
47
46.8
PSNMU-V1.4_AUG-EV-PASAV3_0080850
Pseudo-nitzschia multistriata
5.7e-08
59.3
43
53.5
Pp3c17_13190
Physcomitrella patens
5.7e-08
59.3
79
34.2
Pp3c19_14050
Physcomitrella patens
5.7e-08
59.3
51
45.1
Pp3c6_21080
Physcomitrella patens
5.7e-08
59.3
43
48.8
pte95550
Paramecium tetraurelia
5.7e-08
59.3
50
48.0
AT1G51930
Arabidopsis thaliana
7.4e-08
58.9
51
47.1
AT3G03550
Arabidopsis thaliana
7.4e-08
58.9
47
46.8
AT3G62690
Arabidopsis thaliana
7.4e-08
58.9
77
37.7
AT4G33565
Arabidopsis thaliana
7.4e-08
58.9
49
49.0
gene19455
Fragilariopsis cylindrus
7.4e-08
58.9
43
55.8
PSNMU-V1.4_AUG-EV-PASAV3_0076380
Pseudo-nitzschia multistriata
7.4e-08
58.9
47
48.9
pte451430
Paramecium tetraurelia
7.4e-08
58.9
50
48.0
AT5G42200
Arabidopsis thaliana
9.6e-08
58.5
74
37.8
Cre16.g651400
Chlamydomonas reinhardtii
9.6e-08
58.5
52
46.2
CC00G68660
Cyclotella cryptica
9.6e-08
58.5
46
52.2
Pp3c22_15440
Physcomitrella patens
9.6e-08
58.5
63
42.9
Pp3c22_15530
Physcomitrella patens
9.6e-08
58.5
49
42.9
AT2G25410
Arabidopsis thaliana
1.3e-07
58.2
45
51.1
ps00G103510
Pseudo-nitzschia multiseries
1.3e-07
58.2
43
53.5
AA0005G01700
Aureococcus anophagefferens
1.6e-07
57.8
79
34.2
AT1G35330
Arabidopsis thaliana
1.6e-07
57.8
44
47.7
AT1G49220
Arabidopsis thaliana
1.6e-07
57.8
46
52.2
AT1G74410
Arabidopsis thaliana
1.6e-07
57.8
74
41.9
AT2G46495
Arabidopsis thaliana
1.6e-07
57.8
45
48.9
AT3G10910
Arabidopsis thaliana
1.6e-07
57.8
47
51.1
AT3G18773
Arabidopsis thaliana
1.6e-07
57.8
77
41.6
AT4G09120
Arabidopsis thaliana
1.6e-07
57.8
49
42.9
Pp3c18_7090
Physcomitrella patens
1.6e-07
57.8
69
36.2
AT2G35910
Arabidopsis thaliana
2.1e-07
57.4
45
48.9
AT5G27420
Arabidopsis thaliana
2.1e-07
57.4
47
46.8
AT5G46650
Arabidopsis thaliana
2.1e-07
57.4
48
45.8
CC00G04270
Cyclotella cryptica
2.1e-07
57.4
83
33.7
CC00G30030
Cyclotella cryptica
2.1e-07
57.4
83
33.7
Cre11.g476250
Chlamydomonas reinhardtii
2.8e-07
57.0
43
51.2
pte783360
Paramecium tetraurelia
2.8e-07
57.0
76
30.3
AT2G35000
Arabidopsis thaliana
3.7e-07
56.6
44
43.2
AT2G46493
Arabidopsis thaliana
3.7e-07
56.6
45
48.9
AT2G46494
Arabidopsis thaliana
3.7e-07
56.6
45
48.9
AT3G47180
Arabidopsis thaliana
3.7e-07
56.6
78
37.2
pte777010
Paramecium tetraurelia
3.7e-07
56.6
68
36.8
Pp3c4_30240
Physcomitrella patens
4.8e-07
56.2
45
44.4
pte455470
Paramecium tetraurelia
4.8e-07
56.2
52
46.2
AT4G35480
Arabidopsis thaliana
6.2e-07
55.8
44
45.5
AT5G01880
Arabidopsis thaliana
6.2e-07
55.8
75
40.0
Pp3c17_780
Physcomitrella patens
6.2e-07
55.8
68
36.8
pte659640
Paramecium tetraurelia
6.2e-07
55.8
46
43.5
pte749560
Paramecium tetraurelia
6.2e-07
55.8
46
43.5
ptri174090
Phaeodactylum tricornutum
6.2e-07
55.8
57
35.1
AT1G04360
Arabidopsis thaliana
8.2e-07
55.5
82
34.1
AT1G49210
Arabidopsis thaliana
8.2e-07
55.5
46
50.0
AT1G72200
Arabidopsis thaliana
8.2e-07
55.5
44
45.5
AT2G42350
Arabidopsis thaliana
8.2e-07
55.5
44
43.2
AT4G38140
Arabidopsis thaliana
8.2e-07
55.5
47
51.1
AT5G05280
Arabidopsis thaliana
8.2e-07
55.5
47
48.9
AT5G10380
Arabidopsis thaliana
8.2e-07
55.5
44
47.7
AT5G41430
Arabidopsis thaliana
8.2e-07
55.5
43
46.5
Ec-12_006580
Ectocarpus siliculosus
8.2e-07
55.5
48
43.8
Pp3c19_14040
Physcomitrella patens
8.2e-07
55.5
44
45.5
ps00G81860
Pseudo-nitzschia multiseries
8.2e-07
55.5
46
47.8
pte676370
Paramecium tetraurelia
8.2e-07
55.5
46
50.0
ptri35790
Phaeodactylum tricornutum
8.2e-07
55.5
43
48.8
AT1G76410
Arabidopsis thaliana
1.1e-06
55.1
72
36.1
AT2G47560
Arabidopsis thaliana
1.1e-06
55.1
47
44.7
ENSG00000137075
Homo sapiens
1.1e-06
55.1
43
46.5
Pp3c18_7100
Physcomitrella patens
1.1e-06
55.1
45
44.4
pte42690
Paramecium tetraurelia
1.1e-06
55.1
52
36.5
pte588040
Paramecium tetraurelia
1.1e-06
55.1
76
35.5
AT3G14320
Arabidopsis thaliana
1.4e-06
54.7
47
42.6
AT5G43420
Arabidopsis thaliana
1.4e-06
54.7
55
38.2
Pp3c1_32230
Physcomitrella patens
1.4e-06
54.7
48
39.6
sya00G57230
Synedra acus
1.4e-06
54.7
48
41.7
sya00G116400
Synedra acus
1.4e-06
54.7
48
41.7
AT1G53820
Arabidopsis thaliana
1.8e-06
54.3
47
44.7
AT3G30460
Arabidopsis thaliana
1.8e-06
54.3
90
34.4
AT4G11370
Arabidopsis thaliana
1.8e-06
54.3
50
48.0
ENSG00000157450
Homo sapiens
1.8e-06
54.3
52
46.2
ENSG00000141622
Homo sapiens
1.8e-06
54.3
52
46.2
pte421070
Paramecium tetraurelia
1.8e-06
54.3
49
46.9
AT1G24580
Arabidopsis thaliana
2.4e-06
53.9
46
43.5
Pp3c14_14600
Physcomitrella patens
2.4e-06
53.9
48
37.5
Pp3c1_9560
Physcomitrella patens
2.4e-06
53.9
47
46.8
AT3G20395
Arabidopsis thaliana
3.1e-06
53.5
46
45.7
AT5G37200
Arabidopsis thaliana
3.1e-06
53.5
75
36.0
FBgn0052850
Drosophila melanogaster
3.1e-06
53.5
87
34.5
Naga_100550g1
Nannochloropsis gaditana
3.1e-06
53.5
44
45.5
AT2G34990
Arabidopsis thaliana
4.1e-06
53.1
44
38.6
AT4G11360
Arabidopsis thaliana
4.1e-06
53.1
50
46.0
gene7079
Fragilariopsis cylindrus
4.1e-06
53.1
47
42.6
ENSG00000070423
Homo sapiens
4.1e-06
53.1
67
40.3
ENSG00000113269
Homo sapiens
4.1e-06
53.1
55
38.2
Pp3c22_17730
Physcomitrella patens
4.1e-06
53.1
47
44.7
AT2G42360
Arabidopsis thaliana
5.3e-06
52.8
84
29.8
AT3G19140
Arabidopsis thaliana
5.3e-06
52.8
74
36.5
AT5G05910
Arabidopsis thaliana
5.3e-06
52.8
51
47.1
gsu120780
Galdieria sulphuraria
5.3e-06
52.8
46
47.8
pte413840
Paramecium tetraurelia
5.3e-06
52.8
53
39.6
pte531520
Paramecium tetraurelia
5.3e-06
52.8
45
42.2
pte617100
Paramecium tetraurelia
5.3e-06
52.8
47
38.3
Pp3c2_17560
Physcomitrella patens
6.9e-06
52.4
48
45.8
pte385620
Paramecium tetraurelia
6.9e-06
52.4
79
32.9
pte631510
Paramecium tetraurelia
6.9e-06
52.4
74
31.1
pte663000
Paramecium tetraurelia
6.9e-06
52.4
49
38.8
ptri41190
Phaeodactylum tricornutum
6.9e-06
52.4
62
40.3
Pp3c26_11650
Physcomitrella patens
9.0e-06
52.0
44
45.5
Pp3c1_20780
Physcomitrella patens
9.0e-06
52.0
50
42.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (6 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (5 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (71 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (24 genes)
Seminavis robusta (0 genes)
Synedra acus (2 genes)
Physcomitrella patens (18 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing